Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sigmar1O55242 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Gm13216-201ENSMUST00000117145 591 ntBASIC11.92□□□□□ -0.5
Sigmar1O55242 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.92□□□□□ -0.5
Sigmar1O55242 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sigmar1O55242 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.91□□□□□ -0.5
Sigmar1O55242 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sigmar1O55242 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Gm10420-201ENSMUST00000121713 882 ntBASIC11.91□□□□□ -0.5
Sigmar1O55242 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC11.91□□□□□ -0.5
Sigmar1O55242 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC11.91□□□□□ -0.5
Sigmar1O55242 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC11.91□□□□□ -0.5
Sigmar1O55242 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Sigmar1O55242 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sigmar1O55242 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.91□□□□□ -0.5
Sigmar1O55242 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Sigmar1O55242 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sigmar1O55242 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sigmar1O55242 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sigmar1O55242 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sigmar1O55242 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sigmar1O55242 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.9□□□□□ -0.5
Sigmar1O55242 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Sigmar1O55242 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC11.9□□□□□ -0.5
Sigmar1O55242 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sigmar1O55242 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sigmar1O55242 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Sigmar1O55242 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sigmar1O55242 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sigmar1O55242 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sigmar1O55242 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sigmar1O55242 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sigmar1O55242 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sigmar1O55242 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sigmar1O55242 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sigmar1O55242 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Sigmar1O55242 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sigmar1O55242 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sigmar1O55242 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sigmar1O55242 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sigmar1O55242 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sigmar1O55242 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sigmar1O55242 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sigmar1O55242 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sigmar1O55242 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sigmar1O55242 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sigmar1O55242 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms