Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.88■□□□□ 0.61
Trdmt1O55055 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.88■□□□□ 0.61
Trdmt1O55055 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.88■□□□□ 0.61
Trdmt1O55055 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.88■□□□□ 0.61
Trdmt1O55055 Mzt1-203ENSMUST00000227948 952 ntBASIC18.88■□□□□ 0.61
Trdmt1O55055 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Trdmt1O55055 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Trdmt1O55055 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdmt1O55055 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trdmt1O55055 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trdmt1O55055 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trdmt1O55055 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trdmt1O55055 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trdmt1O55055 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trdmt1O55055 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trdmt1O55055 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trdmt1O55055 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.87■□□□□ 0.61
Trdmt1O55055 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trdmt1O55055 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.86■□□□□ 0.61
Trdmt1O55055 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.86■□□□□ 0.61
Trdmt1O55055 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.86■□□□□ 0.61
Trdmt1O55055 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.86■□□□□ 0.61
Trdmt1O55055 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.86■□□□□ 0.61
Trdmt1O55055 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.86■□□□□ 0.61
Trdmt1O55055 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Trdmt1O55055 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.86■□□□□ 0.61
Trdmt1O55055 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.86■□□□□ 0.61
Trdmt1O55055 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.86■□□□□ 0.61
Trdmt1O55055 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trdmt1O55055 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trdmt1O55055 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.85■□□□□ 0.61
Trdmt1O55055 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trdmt1O55055 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trdmt1O55055 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Gm12895-201ENSMUST00000122214 226 ntBASIC18.85■□□□□ 0.61
Trdmt1O55055 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Gm27459-201ENSMUST00000184860 107 ntBASIC18.85■□□□□ 0.61
Trdmt1O55055 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.85■□□□□ 0.61
Trdmt1O55055 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.85■□□□□ 0.61
Trdmt1O55055 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.85■□□□□ 0.61
Trdmt1O55055 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdmt1O55055 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trdmt1O55055 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trdmt1O55055 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trdmt1O55055 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trdmt1O55055 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trdmt1O55055 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trdmt1O55055 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.84■□□□□ 0.61
Trdmt1O55055 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trdmt1O55055 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trdmt1O55055 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trdmt1O55055 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trdmt1O55055 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trdmt1O55055 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trdmt1O55055 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.83■□□□□ 0.61
Trdmt1O55055 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trdmt1O55055 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.83■□□□□ 0.6
Trdmt1O55055 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trdmt1O55055 Gm28659-201ENSMUST00000188013 759 ntBASIC18.83■□□□□ 0.6
Trdmt1O55055 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trdmt1O55055 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.83■□□□□ 0.6
Trdmt1O55055 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trdmt1O55055 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms