Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prom1O54990 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prom1O54990 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prom1O54990 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prom1O54990 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Prom1O54990 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prom1O54990 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prom1O54990 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prom1O54990 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.91■□□□□ 0.62
Prom1O54990 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prom1O54990 Gm45328-201ENSMUST00000210942 917 ntBASIC18.91■□□□□ 0.62
Prom1O54990 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prom1O54990 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prom1O54990 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prom1O54990 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.9■□□□□ 0.62
Prom1O54990 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Prom1O54990 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.9■□□□□ 0.62
Prom1O54990 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Phf7-203ENSMUST00000226565 1971 ntBASIC18.9■□□□□ 0.62
Prom1O54990 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Prom1O54990 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prom1O54990 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prom1O54990 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prom1O54990 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.89■□□□□ 0.61
Prom1O54990 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.89■□□□□ 0.61
Prom1O54990 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Prom1O54990 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.89■□□□□ 0.61
Prom1O54990 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prom1O54990 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Prom1O54990 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.88■□□□□ 0.61
Prom1O54990 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prom1O54990 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prom1O54990 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.88■□□□□ 0.61
Prom1O54990 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prom1O54990 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.88■□□□□ 0.61
Prom1O54990 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Prom1O54990 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prom1O54990 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Prom1O54990 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prom1O54990 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prom1O54990 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.88■□□□□ 0.61
Prom1O54990 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Prom1O54990 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prom1O54990 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prom1O54990 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.87■□□□□ 0.61
Prom1O54990 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prom1O54990 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.87■□□□□ 0.61
Prom1O54990 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.87■□□□□ 0.61
Prom1O54990 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.87■□□□□ 0.61
Prom1O54990 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prom1O54990 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.87■□□□□ 0.61
Prom1O54990 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Prom1O54990 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prom1O54990 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prom1O54990 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prom1O54990 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Prom1O54990 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prom1O54990 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Prom1O54990 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prom1O54990 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prom1O54990 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prom1O54990 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prom1O54990 Gm11336-201ENSMUST00000118168 334 ntBASIC18.86■□□□□ 0.61
Prom1O54990 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Prom1O54990 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prom1O54990 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.86■□□□□ 0.61
Prom1O54990 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.86■□□□□ 0.61
Prom1O54990 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prom1O54990 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Prom1O54990 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms