Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Gfra3O35118 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gfra3O35118 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gfra3O35118 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gfra3O35118 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gfra3O35118 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gfra3O35118 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gfra3O35118 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.84□□□□□ -0.03
Gfra3O35118 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gfra3O35118 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gfra3O35118 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gfra3O35118 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gfra3O35118 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.84□□□□□ -0.03
Gfra3O35118 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 Gm45058-201ENSMUST00000205810 766 ntBASIC14.83□□□□□ -0.04
Gfra3O35118 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.83□□□□□ -0.04
Gfra3O35118 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Gfra3O35118 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Gfra3O35118 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra3O35118 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Gfra3O35118 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Gfra3O35118 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.82□□□□□ -0.04
Gfra3O35118 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Gfra3O35118 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Gfra3O35118 Gm17661-201ENSMUST00000170317 270 ntBASIC14.82□□□□□ -0.04
Gfra3O35118 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Mir5130-201ENSMUST00000175160 84 ntBASIC14.82□□□□□ -0.04
Gfra3O35118 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Gfra3O35118 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra3O35118 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.81□□□□□ -0.04
Gfra3O35118 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.81□□□□□ -0.04
Gfra3O35118 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.81□□□□□ -0.04
Gfra3O35118 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.81□□□□□ -0.04
Gfra3O35118 Il3ra-202ENSMUST00000223589 738 ntBASIC14.81□□□□□ -0.04
Gfra3O35118 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Gfra3O35118 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Gfra3O35118 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Gfra3O35118 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Gfra3O35118 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Gfra3O35118 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra3O35118 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Gfra3O35118 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Gfra3O35118 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.8□□□□□ -0.04
Gfra3O35118 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms