Protein–RNA interactions for Protein: E9Q8I6

Vmn1r55, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r55E9Q8I6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Mir770-201ENSMUST00000103252 94 ntBASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Gm17807-201ENSMUST00000186869 298 ntBASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r55E9Q8I6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r55E9Q8I6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Gm27000-201ENSMUST00000182943 842 ntBASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r55E9Q8I6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Gm45328-201ENSMUST00000210942 917 ntBASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r55E9Q8I6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r55E9Q8I6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms