Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav23A0A0G2JG17 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.09□□□□□ -0.15
Trav23A0A0G2JG17 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Trav23A0A0G2JG17 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav23A0A0G2JG17 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav23A0A0G2JG17 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav23A0A0G2JG17 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav23A0A0G2JG17 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav23A0A0G2JG17 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav23A0A0G2JG17 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Gm715-201ENSMUST00000117865 831 ntBASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Gm29791-202ENSMUST00000207888 369 ntBASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav23A0A0G2JG17 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Mir6982-201ENSMUST00000184354 68 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms