Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-6A0A075B6B2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-6A0A075B6B2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Gm6211-202ENSMUST00000167849 925 ntBASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-6A0A075B6B2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-6A0A075B6B2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav6n-6A0A075B6B2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms