Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gm44549-201ENSMUST00000208351 577 ntBASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gm6211-202ENSMUST00000167849 925 ntBASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Mir2861-201ENSMUST00000175539 82 ntBASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gm13216-201ENSMUST00000117145 591 ntBASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gm13401-201ENSMUST00000117074 291 ntBASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms