Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm45102-201ENSMUST00000207427 857 ntBASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Trav16d-dv11A0A075B617 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Rps24-207ENSMUST00000224568 714 ntBASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16d-dv11A0A075B617 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav16d-dv11A0A075B617 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav16d-dv11A0A075B617 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trav16d-dv11A0A075B617 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav16d-dv11A0A075B617 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.65□□□□□ -0.39
Trav16d-dv11A0A075B617 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms