Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AL591623.2-201ENST00000449978 222 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 RPSAP64-201ENST00000451820 336 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 RPL34P17-201ENST00000472160 347 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 RPL12P5-201ENST00000475149 392 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC020779.1-201ENST00000478757 796 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC079944.1-201ENST00000485426 495 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 TRBV5-2-201ENST00000489095 273 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 KLF7P1-201ENST00000490941 1048 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC091965.3-201ENST00000506236 208 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 SCARNA20.3-201ENST00000516913 131 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC100823.2-201ENST00000518337 699 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 HNRNPCP8-201ENST00000528764 888 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AP003721.3-201ENST00000543275 405 ntTSL 2 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 PRSS58-201ENST00000547058 913 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 LINC02304-201ENST00000554445 445 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AL445383.1-201ENST00000554689 874 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 APEX1-214ENST00000557054 888 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AL049779.3-201ENST00000557141 606 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC124248.1-201ENST00000558221 402 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC055876.4-201ENST00000562515 712 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 COG4-212ENST00000564653 590 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 BMS1P8-201ENST00000565049 1178 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC008870.2-201ENST00000568262 1024 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 ARMCX7P-202ENST00000602449 655 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 MIR6133-201ENST00000617057 108 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC005703.5-201ENST00000623654 555 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AL513327.1-208ENST00000624012 1047 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC079602.4-201ENST00000637836 532 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 OR51A8P-202ENST00000641606 1038 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 MBIP-201ENST00000318473 1586 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 ABCA9-207ENST00000495634 1428 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 ICE2P1-201ENST00000512800 1849 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC129502.1-201ENST00000623261 1654 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SKP50-201ENST00000364694 315 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SKP28-201ENST00000364770 305 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 FKBP1A-202ENST00000381719 747 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 RNA5SP256-201ENST00000390978 113 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SKP148-201ENST00000410179 275 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 HYALP1-201ENST00000417674 1279 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC114760.1-201ENST00000420310 652 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms