Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL049541.2-201ENST00000626377 555 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC091948.2-201ENST00000636510 279 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 ZNF402P-201ENST00000404435 3100 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 BX284613.1-201ENST00000452221 1641 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 RNA5SP429-201ENST00000363688 109 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 RPL5P5-201ENST00000392009 893 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 PDCL3P5-201ENST00000398028 722 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 RN7SKP268-201ENST00000411107 316 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 HMGB1P32-201ENST00000425971 565 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 RPL5P34-201ENST00000426545 891 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 PUDPP2-201ENST00000431423 643 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 MYO5BP3-201ENST00000431872 1279 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 PHB2P1-201ENST00000434943 890 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 AL604028.2-201ENST00000437848 788 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 RPL5P9-201ENST00000448118 886 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 AGKP1-201ENST00000455254 1263 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 RN7SL741P-201ENST00000482473 289 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 RBMS2P1-201ENST00000525031 1226 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 AL135978.1-201ENST00000553618 1266 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 AC067805.1-201ENST00000559344 470 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 EIF4A3P1-201ENST00000578499 647 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 OR7E19P-202ENST00000589942 844 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 AC245128.3-201ENST00000594721 748 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 AC005753.1-201ENST00000623837 618 ntBASIC7.11□□□□□ -1.27
DKK3Q9UBP4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.11□□□□□ -1.27
DKK3Q9UBP4 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 AC092821.3-202ENST00000641304 2767 ntBASIC7.1□□□□□ -1.27
DKK3Q9UBP4 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 NR1H5P-201ENST00000452683 1377 ntBASIC7.1□□□□□ -1.27
DKK3Q9UBP4 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 AC104581.5-201ENST00000624171 7141 ntBASIC7.1□□□□□ -1.27
DKK3Q9UBP4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 AC006511.2-201ENST00000388966 660 ntBASIC7.1□□□□□ -1.27
DKK3Q9UBP4 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
DKK3Q9UBP4 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms