Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
H3F3AP84243 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
H3F3AP84243 AC093278.2-201ENST00000564956 2485 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
H3F3AP84243 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
H3F3AP84243 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 AC095038.1-201ENST00000429248 1591 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
H3F3AP84243 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
H3F3AP84243 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
H3F3AP84243 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.08□□□□□ -1.44
H3F3AP84243 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3AP84243 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3AP84243 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
H3F3AP84243 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
H3F3AP84243 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 AL451064.2-201ENST00000623514 1654 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3AP84243 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.08□□□□□ -1.44
H3F3AP84243 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
H3F3AP84243 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
H3F3AP84243 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 MIR541-201ENST00000401360 84 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 SETP22-201ENST00000412243 957 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.08□□□□□ -1.44
H3F3AP84243 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3AP84243 AC009244.1-201ENST00000450566 258 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3AP84243 RN7SL382P-201ENST00000482631 282 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 RPL12P7-201ENST00000493832 494 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.08□□□□□ -1.44
H3F3AP84243 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.08□□□□□ -1.44
H3F3AP84243 AC017007.1-201ENST00000511960 415 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.08□□□□□ -1.44
H3F3AP84243 AC122713.1-201ENST00000518368 1015 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 AP005902.2-201ENST00000518393 307 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.08□□□□□ -1.44
H3F3AP84243 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.08□□□□□ -1.44
H3F3AP84243 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.08□□□□□ -1.44
H3F3AP84243 CCDC58P1-201ENST00000578567 430 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 MIR378C-201ENST00000578683 81 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 RN7SL199P-201ENST00000578752 281 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 RN7SL656P-201ENST00000579044 281 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 RN7SL32P-201ENST00000580514 281 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 RN7SL404P-201ENST00000582421 281 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 AC013731.1-201ENST00000604340 883 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 AC139792.1-201ENST00000607051 647 ntBASIC6.08□□□□□ -1.44
H3F3AP84243 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3AP84243 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.08□□□□□ -1.44
H3F3AP84243 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
H3F3AP84243 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
H3F3AP84243 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
H3F3AP84243 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
H3F3AP84243 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
H3F3AP84243 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
H3F3AP84243 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
H3F3AP84243 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
H3F3AP84243 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
H3F3AP84243 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.07□□□□□ -1.44
H3F3AP84243 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
H3F3AP84243 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
H3F3AP84243 AC119674.1-204ENST00000641348 1343 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.07□□□□□ -1.44
H3F3AP84243 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.07□□□□□ -1.44
H3F3AP84243 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
H3F3AP84243 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
H3F3AP84243 RNA5SP442-201ENST00000365050 107 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
H3F3AP84243 RNA5SP474-201ENST00000391234 90 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 AL079341.1-201ENST00000404701 1207 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
H3F3AP84243 GAPDHP57-201ENST00000424400 585 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.07□□□□□ -1.44
H3F3AP84243 AC011742.2-201ENST00000443818 352 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.07□□□□□ -1.44
H3F3AP84243 SLAMF6P1-201ENST00000451067 602 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
H3F3AP84243 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.07□□□□□ -1.44
H3F3AP84243 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.07□□□□□ -1.44
H3F3AP84243 AC117395.1-201ENST00000487390 403 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 AC018639.1-201ENST00000492994 442 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 RPL23AP80-201ENST00000495605 424 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
H3F3AP84243 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.07□□□□□ -1.44
H3F3AP84243 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.07□□□□□ -1.44
H3F3AP84243 AC140063.1-201ENST00000541343 259 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms