Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC6.67□□□□□ -1.34
NR1H2P55055 AL392003.1-201ENST00000434394 243 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AC005040.1-201ENST00000437783 482 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AC239800.1-201ENST00000442049 719 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AL158214.1-201ENST00000444423 404 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.67□□□□□ -1.34
NR1H2P55055 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.67□□□□□ -1.34
NR1H2P55055 RN7SL335P-201ENST00000482790 304 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.67□□□□□ -1.34
NR1H2P55055 AC079768.1-201ENST00000503181 711 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 NPY6R-201ENST00000503807 1112 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AC113352.1-201ENST00000513196 666 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.67□□□□□ -1.34
NR1H2P55055 IGKV1D-32-201ENST00000517449 318 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AC008677.3-201ENST00000519146 666 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.67□□□□□ -1.34
NR1H2P55055 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
NR1H2P55055 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC6.67□□□□□ -1.34
NR1H2P55055 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AC004232.2-201ENST00000574245 821 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.67□□□□□ -1.34
NR1H2P55055 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.67□□□□□ -1.34
NR1H2P55055 AC090241.1-201ENST00000587732 621 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AC024451.4-201ENST00000602578 752 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AL590410.1-201ENST00000617925 333 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 BX005195.1-201ENST00000618097 1198 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AL121985.3-201ENST00000620690 523 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.67□□□□□ -1.34
NR1H2P55055 AC018659.2-201ENST00000624690 715 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.67□□□□□ -1.34
NR1H2P55055 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.67□□□□□ -1.34
NR1H2P55055 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NR1H2P55055 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
NR1H2P55055 KARSP2-201ENST00000415696 1639 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.67□□□□□ -1.34
NR1H2P55055 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.67□□□□□ -1.34
NR1H2P55055 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NR1H2P55055 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NR1H2P55055 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NR1H2P55055 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NR1H2P55055 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NR1H2P55055 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
NR1H2P55055 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.67□□□□□ -1.34
NR1H2P55055 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.67□□□□□ -1.34
NR1H2P55055 CCAT2-201ENST00000630920 1752 ntBASIC6.67□□□□□ -1.34
NR1H2P55055 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.67□□□□□ -1.34
NR1H2P55055 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
NR1H2P55055 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.67□□□□□ -1.34
NR1H2P55055 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NR1H2P55055 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NR1H2P55055 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
NR1H2P55055 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NR1H2P55055 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
NR1H2P55055 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NR1H2P55055 AP003471.1-202ENST00000319051 1988 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NR1H2P55055 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.66□□□□□ -1.34
NR1H2P55055 AP000641.1-201ENST00000531988 1639 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
NR1H2P55055 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NR1H2P55055 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NR1H2P55055 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NR1H2P55055 RN7SKP62-201ENST00000384539 329 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 MIR27A-201ENST00000385073 78 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 TERF1P4-201ENST00000399580 1115 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 AL139039.2-201ENST00000407436 479 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.66□□□□□ -1.34
NR1H2P55055 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NR1H2P55055 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.66□□□□□ -1.34
NR1H2P55055 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.66□□□□□ -1.34
NR1H2P55055 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.66□□□□□ -1.34
NR1H2P55055 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.66□□□□□ -1.34
NR1H2P55055 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.66□□□□□ -1.34
NR1H2P55055 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.66□□□□□ -1.34
NR1H2P55055 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.66□□□□□ -1.34
NR1H2P55055 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
NR1H2P55055 AL034399.1-201ENST00000451535 380 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.66□□□□□ -1.34
NR1H2P55055 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NR1H2P55055 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.66□□□□□ -1.34
NR1H2P55055 MRPL49P1-201ENST00000505951 535 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC6.66□□□□□ -1.34
NR1H2P55055 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NR1H2P55055 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.66□□□□□ -1.34
NR1H2P55055 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.66□□□□□ -1.34
NR1H2P55055 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.66□□□□□ -1.34
NR1H2P55055 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.66□□□□□ -1.34
NR1H2P55055 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.66□□□□□ -1.34
NR1H2P55055 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.66□□□□□ -1.34
NR1H2P55055 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.66□□□□□ -1.34
NR1H2P55055 AC092368.2-201ENST00000565911 600 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 AC022387.2-201ENST00000604050 448 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 AC008385.1-201ENST00000604421 355 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.66□□□□□ -1.34
NR1H2P55055 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.66□□□□□ -1.34
NR1H2P55055 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.66□□□□□ -1.34
NR1H2P55055 AC103564.3-201ENST00000621194 220 ntBASIC6.66□□□□□ -1.34
NR1H2P55055 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.66□□□□□ -1.34
NR1H2P55055 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms