Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.51□□□□□ -1.37
CD40P25942 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 RN7SL657P-201ENST00000582431 293 ntBASIC6.51□□□□□ -1.37
CD40P25942 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.51□□□□□ -1.37
CD40P25942 EXOSC3P2-201ENST00000594464 497 ntBASIC6.51□□□□□ -1.37
CD40P25942 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 AC008536.1-201ENST00000602872 669 ntBASIC6.51□□□□□ -1.37
CD40P25942 AL035417.2-201ENST00000603887 796 ntBASIC6.51□□□□□ -1.37
CD40P25942 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.51□□□□□ -1.37
CD40P25942 U6.48-201ENST00000618523 106 ntBASIC6.51□□□□□ -1.37
CD40P25942 AC026422.1-201ENST00000623961 452 ntBASIC6.51□□□□□ -1.37
CD40P25942 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.51□□□□□ -1.37
CD40P25942 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.51□□□□□ -1.37
CD40P25942 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
CD40P25942 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CD40P25942 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD40P25942 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 AL078595.2-201ENST00000605309 1780 ntBASIC6.51□□□□□ -1.37
CD40P25942 AC133552.3-201ENST00000572236 1869 ntBASIC6.51□□□□□ -1.37
CD40P25942 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD40P25942 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 AC092451.3-201ENST00000625067 1343 ntBASIC6.5□□□□□ -1.37
CD40P25942 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 AC016831.3-201ENST00000446451 1723 ntBASIC6.5□□□□□ -1.37
CD40P25942 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.5□□□□□ -1.37
CD40P25942 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 MFSD8-218ENST00000641186 4448 ntBASIC6.5□□□□□ -1.37
CD40P25942 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 AL590065.1-201ENST00000603371 4774 ntBASIC6.5□□□□□ -1.37
CD40P25942 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.5□□□□□ -1.37
CD40P25942 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CD40P25942 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
CD40P25942 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CD40P25942 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
CD40P25942 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CD40P25942 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.5□□□□□ -1.37
CD40P25942 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 SSX6-201ENST00000376932 562 ntBASIC6.5□□□□□ -1.37
CD40P25942 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CD40P25942 MIR513B-201ENST00000385136 84 ntBASIC6.5□□□□□ -1.37
CD40P25942 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CD40P25942 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CD40P25942 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
CD40P25942 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.5□□□□□ -1.37
CD40P25942 AC107081.1-201ENST00000414975 361 ntBASIC6.5□□□□□ -1.37
CD40P25942 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.5□□□□□ -1.37
CD40P25942 KRR1P1-201ENST00000419430 803 ntBASIC6.5□□□□□ -1.37
CD40P25942 RBM22P7-201ENST00000421321 280 ntBASIC6.5□□□□□ -1.37
CD40P25942 NIP7P1-201ENST00000433227 512 ntBASIC6.5□□□□□ -1.37
CD40P25942 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.5□□□□□ -1.37
CD40P25942 PSMD8P1-201ENST00000436275 769 ntBASIC6.5□□□□□ -1.37
CD40P25942 AC000041.1-201ENST00000439655 175 ntBASIC6.5□□□□□ -1.37
CD40P25942 AL096803.2-201ENST00000450032 677 ntBASIC6.5□□□□□ -1.37
CD40P25942 Z99714.1-201ENST00000450463 807 ntBASIC6.5□□□□□ -1.37
CD40P25942 Z95152.1-201ENST00000453556 656 ntBASIC6.5□□□□□ -1.37
CD40P25942 NAP1L1P3-201ENST00000462291 880 ntBASIC6.5□□□□□ -1.37
CD40P25942 RPL12P40-201ENST00000467028 488 ntBASIC6.5□□□□□ -1.37
CD40P25942 AC005550.2-201ENST00000476382 318 ntBASIC6.5□□□□□ -1.37
CD40P25942 AC134050.1-201ENST00000495088 933 ntBASIC6.5□□□□□ -1.37
CD40P25942 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.5□□□□□ -1.37
CD40P25942 AC016559.1-201ENST00000511420 199 ntBASIC6.5□□□□□ -1.37
CD40P25942 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.5□□□□□ -1.37
CD40P25942 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC6.5□□□□□ -1.37
CD40P25942 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.5□□□□□ -1.37
CD40P25942 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.5□□□□□ -1.37
CD40P25942 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.5□□□□□ -1.37
CD40P25942 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.5□□□□□ -1.37
CD40P25942 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.5□□□□□ -1.37
CD40P25942 AP003717.3-201ENST00000544832 1180 ntBASIC6.5□□□□□ -1.37
CD40P25942 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.5□□□□□ -1.37
CD40P25942 AC009097.3-201ENST00000563557 1018 ntBASIC6.5□□□□□ -1.37
CD40P25942 STX8-209ENST00000574431 731 ntTSL 3 BASIC6.5□□□□□ -1.37
CD40P25942 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.5□□□□□ -1.37
CD40P25942 PCNAP1-202ENST00000595299 752 ntBASIC6.5□□□□□ -1.37
CD40P25942 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.5□□□□□ -1.37
CD40P25942 NDUFB9P1-201ENST00000604683 510 ntBASIC6.5□□□□□ -1.37
CD40P25942 U47924.1-201ENST00000606539 434 ntBASIC6.5□□□□□ -1.37
CD40P25942 AC092954.1-201ENST00000609121 445 ntBASIC6.5□□□□□ -1.37
CD40P25942 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD40P25942 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.5□□□□□ -1.37
CD40P25942 AC104985.3-201ENST00000623479 597 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms