Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC6.23□□□□□ -1.41
SPTA1P02549 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 ARG1-202ENST00000356962 1468 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SPTA1P02549 SNORA77.2-201ENST00000408571 112 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.23□□□□□ -1.41
SPTA1P02549 MTND6P12-201ENST00000428247 522 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 SALL1P1-201ENST00000438101 3837 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 RN7SL180P-201ENST00000466769 294 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.23□□□□□ -1.41
SPTA1P02549 MTATP6P1-201ENST00000514057 681 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.23□□□□□ -1.41
SPTA1P02549 RPL29P33-201ENST00000587474 316 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.23□□□□□ -1.41
SPTA1P02549 AL589863.1-201ENST00000595383 631 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SPTA1P02549 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SPTA1P02549 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SPTA1P02549 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.23□□□□□ -1.41
SPTA1P02549 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 RN7SKP286-201ENST00000410894 299 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.23□□□□□ -1.41
SPTA1P02549 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.23□□□□□ -1.41
SPTA1P02549 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 ELOCP3-201ENST00000439303 348 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.23□□□□□ -1.41
SPTA1P02549 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SPTA1P02549 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.23□□□□□ -1.41
SPTA1P02549 AL390198.2-201ENST00000510553 222 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 AC006499.4-201ENST00000510947 694 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.23□□□□□ -1.41
SPTA1P02549 AC026774.2-201ENST00000513990 1098 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 SCARNA5-201ENST00000516201 276 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 IGLC4-201ENST00000517690 248 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.23□□□□□ -1.41
SPTA1P02549 AC245052.7-201ENST00000601161 359 ntBASIC6.23□□□□□ -1.41
SPTA1P02549 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.22□□□□□ -1.41
SPTA1P02549 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.22□□□□□ -1.41
SPTA1P02549 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SPTA1P02549 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 RARSP1-201ENST00000542842 1418 ntBASIC6.22□□□□□ -1.41
SPTA1P02549 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.22□□□□□ -1.41
SPTA1P02549 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 RPL5P20-201ENST00000403848 896 ntBASIC6.22□□□□□ -1.41
SPTA1P02549 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.22□□□□□ -1.41
SPTA1P02549 MRPS21P5-201ENST00000417885 231 ntBASIC6.22□□□□□ -1.41
SPTA1P02549 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.22□□□□□ -1.41
SPTA1P02549 AC010878.1-201ENST00000456500 1047 ntBASIC6.22□□□□□ -1.41
SPTA1P02549 NDUFB5P1-201ENST00000508134 564 ntBASIC6.22□□□□□ -1.41
SPTA1P02549 AC022296.2-201ENST00000512424 202 ntBASIC6.22□□□□□ -1.41
SPTA1P02549 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.22□□□□□ -1.41
SPTA1P02549 PPIAP6-201ENST00000557078 499 ntBASIC6.22□□□□□ -1.41
SPTA1P02549 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.22□□□□□ -1.41
SPTA1P02549 AC010323.2-201ENST00000596405 594 ntBASIC6.22□□□□□ -1.41
SPTA1P02549 AL589743.6-201ENST00000611025 117 ntBASIC6.22□□□□□ -1.41
SPTA1P02549 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC6.22□□□□□ -1.41
SPTA1P02549 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.22□□□□□ -1.41
SPTA1P02549 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.22□□□□□ -1.41
SPTA1P02549 CASC19-246ENST00000641625 1606 ntBASIC6.22□□□□□ -1.41
SPTA1P02549 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 AL136981.1-203ENST00000451452 3844 ntBASIC6.22□□□□□ -1.41
SPTA1P02549 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SPTA1P02549 OR8B9P-202ENST00000642028 5216 ntBASIC6.22□□□□□ -1.41
SPTA1P02549 AL590635.1-201ENST00000406314 586 ntBASIC6.21□□□□□ -1.41
SPTA1P02549 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC6.21□□□□□ -1.41
SPTA1P02549 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.21□□□□□ -1.41
SPTA1P02549 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.21□□□□□ -1.41
SPTA1P02549 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.21□□□□□ -1.41
SPTA1P02549 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.21□□□□□ -1.41
SPTA1P02549 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.21□□□□□ -1.41
SPTA1P02549 RN7SL390P-201ENST00000470634 284 ntBASIC6.21□□□□□ -1.41
SPTA1P02549 RN7SL717P-201ENST00000478343 297 ntBASIC6.21□□□□□ -1.41
SPTA1P02549 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SPTA1P02549 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.21□□□□□ -1.41
SPTA1P02549 ZNF519P4-201ENST00000514008 125 ntBASIC6.21□□□□□ -1.41
SPTA1P02549 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms