Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 ZNF101P1-201ENST00000435701 1720 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 WASF5P-205ENST00000428639 1455 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AL390039.1-201ENST00000399148 611 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 GAPDHP73-201ENST00000423411 1007 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 RPE-205ENST00000429907 925 ntTSL 2 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 KATNBL1P2-201ENST00000433311 835 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 KIF3AP1-201ENST00000454055 611 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 RPL34P34-201ENST00000465389 354 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 RPL23AP8-201ENST00000479812 475 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AL031073.1-201ENST00000503029 1139 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC083906.1-201ENST00000509298 406 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC023794.3-204ENST00000510754 236 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 PRR13P5-201ENST00000596581 442 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC008626.1-201ENST00000604384 255 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AL731533.2-201ENST00000607898 578 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC016394.1-201ENST00000608444 833 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 EIF5P2-201ENST00000618904 1035 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC090099.1-204ENST00000623626 849 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 MTND5P12-201ENST00000502851 1449 ntBASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RBFOX3A6NFN3 AC011455.2-201ENST00000599320 3336 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AC011815.2-201ENST00000618230 2021 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AC010401.2-201ENST00000575137 4934 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 RNA5SP350-201ENST00000363298 111 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 SNORA38B-201ENST00000363524 131 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 GNG5P2-201ENST00000372054 207 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AL050335.1-201ENST00000396909 869 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 RN7SKP161-201ENST00000411110 305 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 CTSLP8-201ENST00000413075 967 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 RPL23AP34-201ENST00000423483 410 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 RN7SL621P-201ENST00000472565 299 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 RN7SL392P-201ENST00000473024 299 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 NPM1P27-201ENST00000502784 830 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 RNA5SP278-201ENST00000517055 102 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AC008677.3-201ENST00000519146 666 ntBASIC5.28□□□□□ -1.56
RBFOX3A6NFN3 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms