Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC129502.1-201ENST00000623261 1654 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC120036.2-201ENST00000509729 1474 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 MXI1-204ENST00000369612 879 ntTSL 3 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 RN7SKP148-201ENST00000410179 275 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 RPL12P10-201ENST00000413498 498 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 CR391992.1-201ENST00000438601 394 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 RPL6P24-201ENST00000445338 864 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 BZW1P1-201ENST00000454901 1240 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC010878.1-201ENST00000456500 1047 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 TUBBP11-201ENST00000472255 252 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC073581.1-201ENST00000519036 575 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC100854.1-201ENST00000520351 341 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 OR4C1P-201ENST00000530880 937 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC027667.1-201ENST00000545814 304 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AL135978.1-201ENST00000553618 1266 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AP006587.6-201ENST00000582128 1091 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 COX6CP16-201ENST00000603667 216 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AL035417.2-201ENST00000603887 796 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 RN7SL126P-201ENST00000616400 299 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AL161420.1-201ENST00000619393 264 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC069542.2-201ENST00000624816 216 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 CCDC150P1-201ENST00000537123 2215 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC093278.2-201ENST00000564956 2485 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 AC096992.2-201ENST00000609553 1684 ntBASIC5.98□□□□□ -1.45
RHBDD3Q9Y3P4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 MAPK10-261ENST00000641050 3109 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 Z93929.1-201ENST00000418200 1475 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 AC023886.2-201ENST00000321285 411 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 RNA5SP512-201ENST00000364550 120 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 NPM1P31-201ENST00000399021 764 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 RPL14P5-201ENST00000436474 730 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 AC019185.3-201ENST00000438805 323 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 AC005517.1-201ENST00000452091 489 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 GAPDHP53-201ENST00000458397 924 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 RN7SL563P-201ENST00000481233 298 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 AC106760.2-201ENST00000504159 619 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 IGLVV-66-201ENST00000523818 341 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 EIF4A3P1-201ENST00000578499 647 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 AC011193.2-201ENST00000582638 367 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 AC092032.1-201ENST00000603090 165 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 AC092960.1-201ENST00000604762 351 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 AC122710.3-201ENST00000606566 541 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms