Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RN7SL182P-201ENST00000496499 300 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC008628.1-201ENST00000508663 265 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC073581.1-201ENST00000519036 575 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AP001994.1-201ENST00000527539 826 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNX18Q96RF0 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 CR383656.14-201ENST00000551951 406 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC139792.1-201ENST00000607051 647 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AL512506.1-201ENST00000613918 449 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 uc_338.21-201ENST00000622458 147 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 DDX50P1-201ENST00000438163 2400 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SNX18Q96RF0 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNX18Q96RF0 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SNX18Q96RF0 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC079949.2-201ENST00000617117 2933 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 TMCC1P1-201ENST00000518897 1980 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 MIR199B-201ENST00000384849 110 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 OR1F12-201ENST00000402365 945 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 GTF3AP1-201ENST00000416942 1004 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 AC073310.1-201ENST00000423226 1033 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 CYP4F32P-201ENST00000426492 504 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 Z85994.2-201ENST00000434327 452 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 SEPT14P12-201ENST00000442280 560 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 AC097263.1-201ENST00000496795 606 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 CASP1P2-201ENST00000526830 1258 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 HNRNPCP8-201ENST00000528764 888 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 CRADD-210ENST00000552033 622 ntTSL 3 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 MIR5095-201ENST00000578844 88 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 BNIP3P27-201ENST00000599991 412 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 AC023513.1-201ENST00000604396 691 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 AC022306.3-201ENST00000619930 550 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 AL356490.1-201ENST00000623079 479 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 OR5AU1-204ENST00000641822 1197 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 AC090771.1-201ENST00000585803 1618 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 AC007159.1-201ENST00000566529 4706 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.49□□□□□ -1.37
SNX18Q96RF0 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 TTC41P-205ENST00000551270 3963 ntBASIC6.49□□□□□ -1.37
SNX18Q96RF0 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNX18Q96RF0 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms