Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CX3CL1P78423 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC5.62□□□□□ -1.51
CX3CL1P78423 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.62□□□□□ -1.51
CX3CL1P78423 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
CX3CL1P78423 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.62□□□□□ -1.51
CX3CL1P78423 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.62□□□□□ -1.51
CX3CL1P78423 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CX3CL1P78423 RPL10P16-201ENST00000325000 645 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.62□□□□□ -1.51
CX3CL1P78423 RN7SKP232-201ENST00000410170 290 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 NFU1P1-201ENST00000413128 774 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.62□□□□□ -1.51
CX3CL1P78423 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC5.62□□□□□ -1.51
CX3CL1P78423 RSL24D1P8-201ENST00000434442 492 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 OR52U1P-201ENST00000439752 923 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.62□□□□□ -1.51
CX3CL1P78423 RPLP0P1-201ENST00000457002 361 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.62□□□□□ -1.51
CX3CL1P78423 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 RN7SKP242-201ENST00000515967 289 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.62□□□□□ -1.51
CX3CL1P78423 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.62□□□□□ -1.51
CX3CL1P78423 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.62□□□□□ -1.51
CX3CL1P78423 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 AC126177.6-201ENST00000550420 1009 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.62□□□□□ -1.51
CX3CL1P78423 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.62□□□□□ -1.51
CX3CL1P78423 AC018558.5-201ENST00000565840 952 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 AC012510.1-201ENST00000607946 759 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC5.62□□□□□ -1.51
CX3CL1P78423 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 AL118508.4-201ENST00000624142 1176 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 AL049541.2-201ENST00000626377 555 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC5.62□□□□□ -1.51
CX3CL1P78423 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 AC122713.2-201ENST00000624942 3335 ntBASIC5.62□□□□□ -1.51
CX3CL1P78423 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.62□□□□□ -1.51
CX3CL1P78423 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.62□□□□□ -1.51
CX3CL1P78423 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CX3CL1P78423 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
CX3CL1P78423 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CX3CL1P78423 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC5.61□□□□□ -1.51
CX3CL1P78423 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.61□□□□□ -1.51
CX3CL1P78423 LCOR-201ENST00000286067 4542 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.61□□□□□ -1.51
CX3CL1P78423 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 AC023886.2-201ENST00000321285 411 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 SNORA70.5-201ENST00000365519 135 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CX3CL1P78423 RN7SKP62-201ENST00000384539 329 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CX3CL1P78423 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC5.61□□□□□ -1.51
CX3CL1P78423 NPM1P31-201ENST00000399021 764 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 TPTE2P2-201ENST00000403471 1466 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC5.61□□□□□ -1.51
CX3CL1P78423 VDAC1P10-201ENST00000416715 891 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 AC134879.1-201ENST00000426062 394 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.61□□□□□ -1.51
CX3CL1P78423 AC092646.2-201ENST00000431242 2095 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 FECHP1-201ENST00000431896 1214 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 RPL29P7-201ENST00000440227 457 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.61□□□□□ -1.51
CX3CL1P78423 AL034399.1-201ENST00000451535 380 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 BX323845.2-201ENST00000458382 234 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.61□□□□□ -1.51
CX3CL1P78423 AC091982.1-202ENST00000473923 343 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms