Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 OR4A1P-201ENST00000532342 920 ntBASIC7.15□□□□□ -1.26
DKK3Q9UBP4 MIR4800-201ENST00000537353 80 ntBASIC7.15□□□□□ -1.26
DKK3Q9UBP4 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 ARGFXP2-201ENST00000579304 949 ntBASIC7.15□□□□□ -1.26
DKK3Q9UBP4 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 MIR6889-201ENST00000613185 59 ntBASIC7.15□□□□□ -1.26
DKK3Q9UBP4 AC007671.1-201ENST00000616957 830 ntBASIC7.15□□□□□ -1.26
DKK3Q9UBP4 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
DKK3Q9UBP4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.15□□□□□ -1.27
DKK3Q9UBP4 AL358913.2-201ENST00000553881 1548 ntBASIC7.15□□□□□ -1.27
DKK3Q9UBP4 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
DKK3Q9UBP4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
DKK3Q9UBP4 AL049634.1-201ENST00000453770 1720 ntBASIC7.15□□□□□ -1.27
DKK3Q9UBP4 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
DKK3Q9UBP4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
DKK3Q9UBP4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.15□□□□□ -1.27
DKK3Q9UBP4 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.15□□□□□ -1.27
DKK3Q9UBP4 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.15□□□□□ -1.27
DKK3Q9UBP4 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.15□□□□□ -1.27
DKK3Q9UBP4 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
DKK3Q9UBP4 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 OR5T3-201ENST00000303059 1023 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AC083799.1-201ENST00000366451 910 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 OR6K3-202ENST00000368146 996 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 RN7SKP221-201ENST00000410420 301 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 CAP1P2-201ENST00000417455 1409 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 NME1P1-201ENST00000420914 382 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 OR7E7P-201ENST00000455678 1012 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 RPS16P9-201ENST00000477220 427 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 RN7SL518P-201ENST00000491887 280 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AL135933.1-201ENST00000498657 802 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AC079866.1-201ENST00000534985 1220 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 SNX18P3-202ENST00000565670 1750 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 ADAD1P2-201ENST00000588476 646 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AC063962.1-201ENST00000608199 521 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AL121583.1-201ENST00000612444 682 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AL161420.1-201ENST00000619393 264 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AC020978.9-201ENST00000624380 1141 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AC127071.1-201ENST00000624997 712 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 AC138627.1-204ENST00000641894 765 ntBASIC7.14□□□□□ -1.27
DKK3Q9UBP4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
DKK3Q9UBP4 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 MAPK10-383ENST00000642032 3390 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms