Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC006116.1-201ENST00000587908 2171 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VMP1Q96GC9 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC023886.2-201ENST00000321285 411 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VMP1Q96GC9 RNA5SP177-201ENST00000410122 107 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 AL627308.2-201ENST00000420014 432 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 PHB2P1-201ENST00000434943 890 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC114755.4-201ENST00000439114 443 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC239800.1-201ENST00000442049 719 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 AP002371.1-201ENST00000463604 433 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 EIF4E2P2-201ENST00000492033 736 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC106800.2-201ENST00000514009 1103 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 RPL10P18-201ENST00000519384 309 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 BCAS2P1-201ENST00000528022 632 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 OR5M4P-201ENST00000529436 925 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 NDUFA3P2-201ENST00000531434 232 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC092368.2-201ENST00000565911 600 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC011193.2-201ENST00000582638 367 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 AL354950.1-201ENST00000614150 568 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 AL133320.1-201ENST00000621423 2352 ntBASIC6.77□□□□□ -1.33
VMP1Q96GC9 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VMP1Q96GC9 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
VMP1Q96GC9 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VMP1Q96GC9 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VMP1Q96GC9 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.77□□□□□ -1.33
VMP1Q96GC9 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 AC004014.2-201ENST00000623718 5122 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 AC125232.1-201ENST00000452554 1408 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 MIR199B-201ENST00000384849 110 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 GEMIN2P2-201ENST00000418195 715 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 AL138479.1-201ENST00000426913 484 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 RPL23P10-201ENST00000468780 412 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 PGBD4P1-201ENST00000473644 407 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 AC128716.1-201ENST00000475129 166 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 RNU6-943P-201ENST00000516960 98 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 AC100854.1-201ENST00000520351 341 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 AC016839.1-201ENST00000578162 867 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 RPSAP66-201ENST00000592196 606 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 COX6CP16-201ENST00000603667 216 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 AC023206.1-201ENST00000605824 298 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 AC122710.3-201ENST00000606566 541 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 AC113361.1-201ENST00000606683 543 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 AL121985.2-201ENST00000621192 555 ntBASIC6.76□□□□□ -1.33
VMP1Q96GC9 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms