Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
CX3CL1P78423 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
CX3CL1P78423 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CX3CL1P78423 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CX3CL1P78423 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.64□□□□□ -1.51
CX3CL1P78423 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
CX3CL1P78423 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.64□□□□□ -1.51
CX3CL1P78423 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CX3CL1P78423 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
CX3CL1P78423 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CX3CL1P78423 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CX3CL1P78423 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CX3CL1P78423 AC127070.3-201ENST00000503695 3263 ntBASIC5.64□□□□□ -1.51
CX3CL1P78423 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CX3CL1P78423 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CX3CL1P78423 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CX3CL1P78423 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CX3CL1P78423 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CX3CL1P78423 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CX3CL1P78423 AL356361.1-201ENST00000400943 1459 ntBASIC5.64□□□□□ -1.51
CX3CL1P78423 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC5.64□□□□□ -1.51
CX3CL1P78423 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.64□□□□□ -1.51
CX3CL1P78423 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CX3CL1P78423 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.64□□□□□ -1.51
CX3CL1P78423 AL121949.2-201ENST00000403446 1548 ntBASIC5.64□□□□□ -1.51
CX3CL1P78423 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CX3CL1P78423 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 AL353763.1-201ENST00000624467 1628 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC5.63□□□□□ -1.51
CX3CL1P78423 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.63□□□□□ -1.51
CX3CL1P78423 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC5.63□□□□□ -1.51
CX3CL1P78423 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 OR5T3-201ENST00000303059 1023 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 RNU6-891P-201ENST00000384280 111 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CX3CL1P78423 RN7SKP254-201ENST00000410685 310 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 VN1R66P-201ENST00000412929 916 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC5.63□□□□□ -1.51
CX3CL1P78423 AL157698.1-201ENST00000415190 1011 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.63□□□□□ -1.51
CX3CL1P78423 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.63□□□□□ -1.51
CX3CL1P78423 ANXA2P2-201ENST00000435128 1020 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 BTBD7P2-201ENST00000441962 620 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 AL353803.3-201ENST00000444641 335 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 SDHCP3-201ENST00000445371 506 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CX3CL1P78423 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC5.63□□□□□ -1.51
CX3CL1P78423 OR52Y1P-201ENST00000452418 828 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 AC114755.1-201ENST00000453101 868 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 WBP1LP1-201ENST00000460451 896 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 RPL5P15-201ENST00000475870 897 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 MYL6P4-201ENST00000477911 453 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 TRBV8-1-201ENST00000481590 279 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 AC068522.1-201ENST00000482895 345 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 AC106760.2-201ENST00000504159 619 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.63□□□□□ -1.51
CX3CL1P78423 RNA5SP518-201ENST00000515957 119 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 RNA5SP116-201ENST00000516132 98 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC5.63□□□□□ -1.51
CX3CL1P78423 GLYATL1P4-201ENST00000529326 906 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 OR4C1P-201ENST00000530880 937 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 AC090971.3-201ENST00000557871 1041 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC5.63□□□□□ -1.51
CX3CL1P78423 AC023827.2-201ENST00000566880 1061 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.63□□□□□ -1.51
CX3CL1P78423 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.63□□□□□ -1.51
CX3CL1P78423 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.63□□□□□ -1.51
CX3CL1P78423 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.63□□□□□ -1.51
CX3CL1P78423 BX322635.1-201ENST00000605804 496 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 AL021368.1-201ENST00000607490 540 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 AC012467.1-201ENST00000607740 256 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 AC117490.2-201ENST00000610042 594 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CX3CL1P78423 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC5.63□□□□□ -1.51
CX3CL1P78423 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 AC112243.1-201ENST00000623949 3851 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC5.63□□□□□ -1.51
CX3CL1P78423 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC5.63□□□□□ -1.51
CX3CL1P78423 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC5.63□□□□□ -1.51
CX3CL1P78423 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CX3CL1P78423 MAPK10-270ENST00000641102 3538 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CX3CL1P78423 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CX3CL1P78423 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.63□□□□□ -1.51
CX3CL1P78423 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 AC132219.2-201ENST00000624416 2327 ntBASIC5.63□□□□□ -1.51
CX3CL1P78423 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CX3CL1P78423 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CX3CL1P78423 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CX3CL1P78423 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms