Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL590762.1-201ENST00000391782 432 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AL355862.1-201ENST00000412705 353 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC020983.1-201ENST00000417063 543 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC023141.1-201ENST00000419418 379 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC093107.1-201ENST00000422772 609 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AL138479.1-201ENST00000426913 484 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 PHB2P1-201ENST00000434943 890 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AL158214.1-201ENST00000444423 404 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC018475.1-201ENST00000478358 465 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 RN7SL282P-201ENST00000479676 297 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC016550.1-201ENST00000505348 785 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC025768.1-201ENST00000510057 267 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC017007.1-201ENST00000511960 415 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AP003102.1-201ENST00000525638 661 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC023080.1-201ENST00000551663 931 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC103968.1-201ENST00000557841 573 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 OR4H6P-202ENST00000603819 340 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC117490.2-201ENST00000610042 594 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 BNIP3P41-202ENST00000616656 861 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC016957.2-201ENST00000616998 848 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC243830.2-201ENST00000618067 630 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC027506.1-201ENST00000621395 198 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC110769.3-201ENST00000624567 1173 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 CLCA3P-203ENST00000490028 2781 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 DDX50P1-201ENST00000438163 2400 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 UG0898H09-202ENST00000623646 7040 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AP001002.1-201ENST00000625148 1513 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 RNF19BPY-201ENST00000458209 1550 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 MTND4LP7-201ENST00000431728 294 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 GAPDHP34-201ENST00000432112 823 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 RPL5P27-201ENST00000437011 881 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC108039.2-201ENST00000440214 359 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AL356390.1-201ENST00000455684 397 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 RPS4XP23-201ENST00000487801 237 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC097263.1-201ENST00000496795 606 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 TPT1P8-201ENST00000510120 555 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC106774.2-201ENST00000510266 406 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 HMGN1P15-201ENST00000513870 295 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC027667.1-201ENST00000545814 304 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 CRADD-210ENST00000552033 622 ntTSL 3 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC009712.1-201ENST00000564938 316 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 AC097376.1-201ENST00000602907 997 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms