Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 AC011352.2-201ENST00000514574 1016 ntBASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 PRR13P3-201ENST00000603578 376 ntBASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 AC021422.1-201ENST00000621212 473 ntBASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 AC012254.5-201ENST00000623573 478 ntBASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 TTC41P-205ENST00000551270 3963 ntBASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC50Q8IVM0 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CCDC50Q8IVM0 AC127024.8-201ENST00000623719 2094 ntBASIC7.21□□□□□ -1.25
CCDC50Q8IVM0 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
CCDC50Q8IVM0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CCDC50Q8IVM0 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.21□□□□□ -1.25
CCDC50Q8IVM0 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.21□□□□□ -1.25
CCDC50Q8IVM0 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.21□□□□□ -1.25
CCDC50Q8IVM0 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.21□□□□□ -1.25
CCDC50Q8IVM0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.21□□□□□ -1.25
CCDC50Q8IVM0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CCDC50Q8IVM0 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.21□□□□□ -1.25
CCDC50Q8IVM0 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 RN7SKP55-201ENST00000364888 307 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 RPS3AP5-201ENST00000389400 821 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 RPSAP44-201ENST00000406712 884 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 RNA5SP177-201ENST00000410122 107 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 RN7SKP148-201ENST00000410179 275 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AL157698.1-201ENST00000415190 1011 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 CYP4F34P-201ENST00000425951 481 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 FTLP17-201ENST00000432567 525 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 NIP7P1-201ENST00000433227 512 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AC019080.2-201ENST00000453859 394 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AC111000.1-201ENST00000514545 713 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 IGLVV-66-201ENST00000523818 341 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AP006587.5-201ENST00000532033 739 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 NXPE2P1-201ENST00000543705 726 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AL591767.3-201ENST00000554632 525 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 MIR4685-201ENST00000578185 69 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 MIR4258-201ENST00000580920 91 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 RN7SL126P-201ENST00000616400 299 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AP005212.3-201ENST00000619964 528 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AC018659.2-201ENST00000624690 715 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 AC062029.1-202ENST00000606164 3651 ntBASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
CCDC50Q8IVM0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AC125232.1-201ENST00000452554 1408 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms