Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PSMA6P2-201ENST00000457574 686 ntBASIC7.87□□□□□ -1.15
CCNA1P78396 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.87□□□□□ -1.15
CCNA1P78396 RN7SL413P-201ENST00000482700 297 ntBASIC7.87□□□□□ -1.15
CCNA1P78396 PFN1P8-201ENST00000497012 543 ntBASIC7.87□□□□□ -1.15
CCNA1P78396 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CCNA1P78396 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.87□□□□□ -1.15
CCNA1P78396 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.87□□□□□ -1.15
CCNA1P78396 AC087360.1-201ENST00000518788 616 ntBASIC7.87□□□□□ -1.15
CCNA1P78396 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CCNA1P78396 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.87□□□□□ -1.15
CCNA1P78396 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.87□□□□□ -1.15
CCNA1P78396 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.87□□□□□ -1.15
CCNA1P78396 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.87□□□□□ -1.15
CCNA1P78396 ULK4P2-202ENST00000564187 492 ntBASIC7.87□□□□□ -1.15
CCNA1P78396 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCNA1P78396 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
CCNA1P78396 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCNA1P78396 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.87□□□□□ -1.15
CCNA1P78396 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.87□□□□□ -1.15
CCNA1P78396 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.87□□□□□ -1.15
CCNA1P78396 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC7.87□□□□□ -1.15
CCNA1P78396 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.87□□□□□ -1.15
CCNA1P78396 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.87□□□□□ -1.15
CCNA1P78396 AC006328.2-201ENST00000623198 397 ntBASIC7.87□□□□□ -1.15
CCNA1P78396 AC012005.2-201ENST00000624333 397 ntBASIC7.87□□□□□ -1.15
CCNA1P78396 AL355480.1-201ENST00000629041 99 ntBASIC7.87□□□□□ -1.15
CCNA1P78396 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.87□□□□□ -1.15
CCNA1P78396 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCNA1P78396 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.87□□□□□ -1.15
CCNA1P78396 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.87□□□□□ -1.15
CCNA1P78396 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCNA1P78396 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCNA1P78396 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCNA1P78396 PHF2P2-202ENST00000444553 2865 ntBASIC7.87□□□□□ -1.15
CCNA1P78396 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCNA1P78396 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCNA1P78396 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCNA1P78396 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CCNA1P78396 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.86□□□□□ -1.15
CCNA1P78396 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.86□□□□□ -1.15
CCNA1P78396 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.86□□□□□ -1.15
CCNA1P78396 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.86□□□□□ -1.15
CCNA1P78396 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.86□□□□□ -1.15
CCNA1P78396 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 AL355375.1-201ENST00000405686 392 ntBASIC7.86□□□□□ -1.15
CCNA1P78396 MIR1275-201ENST00000408770 80 ntBASIC7.86□□□□□ -1.15
CCNA1P78396 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.86□□□□□ -1.15
CCNA1P78396 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.86□□□□□ -1.15
CCNA1P78396 AL590128.1-201ENST00000433407 286 ntBASIC7.86□□□□□ -1.15
CCNA1P78396 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.86□□□□□ -1.15
CCNA1P78396 RPSAP40-201ENST00000442343 891 ntBASIC7.86□□□□□ -1.15
CCNA1P78396 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.86□□□□□ -1.15
CCNA1P78396 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.86□□□□□ -1.15
CCNA1P78396 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.86□□□□□ -1.15
CCNA1P78396 AL358876.1-201ENST00000453364 1075 ntBASIC7.86□□□□□ -1.15
CCNA1P78396 CCNJP2-201ENST00000457810 1163 ntBASIC7.86□□□□□ -1.15
CCNA1P78396 AC021146.11-201ENST00000503319 491 ntBASIC7.86□□□□□ -1.15
CCNA1P78396 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.86□□□□□ -1.15
CCNA1P78396 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.86□□□□□ -1.15
CCNA1P78396 AC124891.1-201ENST00000536322 519 ntBASIC7.86□□□□□ -1.15
CCNA1P78396 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.86□□□□□ -1.15
CCNA1P78396 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 AC023827.2-201ENST00000566880 1061 ntBASIC7.86□□□□□ -1.15
CCNA1P78396 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.86□□□□□ -1.15
CCNA1P78396 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.86□□□□□ -1.15
CCNA1P78396 RAB28P4-201ENST00000622233 665 ntBASIC7.86□□□□□ -1.15
CCNA1P78396 AC073592.6-201ENST00000624271 415 ntBASIC7.86□□□□□ -1.15
CCNA1P78396 AL121936.2-201ENST00000641935 662 ntBASIC7.86□□□□□ -1.15
CCNA1P78396 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CCNA1P78396 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.86□□□□□ -1.15
CCNA1P78396 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.86□□□□□ -1.15
CCNA1P78396 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
CCNA1P78396 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.86□□□□□ -1.15
CCNA1P78396 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCNA1P78396 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.86□□□□□ -1.15
CCNA1P78396 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.85□□□□□ -1.15
CCNA1P78396 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCNA1P78396 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.85□□□□□ -1.15
CCNA1P78396 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCNA1P78396 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CCNA1P78396 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CCNA1P78396 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
CCNA1P78396 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
CCNA1P78396 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCNA1P78396 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCNA1P78396 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCNA1P78396 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
CCNA1P78396 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms