Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.96□□□□□ -1.3
LIMK2P53671 RN7SL32P-201ENST00000580514 281 ntBASIC6.96□□□□□ -1.3
LIMK2P53671 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.96□□□□□ -1.3
LIMK2P53671 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.96□□□□□ -1.3
LIMK2P53671 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.96□□□□□ -1.3
LIMK2P53671 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.96□□□□□ -1.3
LIMK2P53671 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIMK2P53671 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIMK2P53671 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIMK2P53671 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.96□□□□□ -1.3
LIMK2P53671 AL031123.3-201ENST00000623345 1837 ntBASIC6.96□□□□□ -1.3
LIMK2P53671 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.96□□□□□ -1.3
LIMK2P53671 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LIMK2P53671 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIMK2P53671 AC105114.1-201ENST00000624795 1862 ntBASIC6.96□□□□□ -1.3
LIMK2P53671 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LIMK2P53671 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.96□□□□□ -1.3
LIMK2P53671 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIMK2P53671 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIMK2P53671 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIMK2P53671 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.95□□□□□ -1.3
LIMK2P53671 MAPK10-379ENST00000642013 1385 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.95□□□□□ -1.3
LIMK2P53671 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 AC023632.6-201ENST00000624338 2177 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC6.95□□□□□ -1.3
LIMK2P53671 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.95□□□□□ -1.3
LIMK2P53671 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.95□□□□□ -1.3
LIMK2P53671 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 HSPE1P27-201ENST00000430808 296 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.95□□□□□ -1.3
LIMK2P53671 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 AC091982.1-202ENST00000473923 343 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 AC139272.1-201ENST00000505516 640 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 MRPS5P3-201ENST00000515577 166 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 SCARNA6-201ENST00000515982 265 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.95□□□□□ -1.3
LIMK2P53671 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.95□□□□□ -1.3
LIMK2P53671 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.95□□□□□ -1.3
LIMK2P53671 MIR5095-201ENST00000578844 88 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 MIR5682-201ENST00000584864 76 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 AC048341.3-201ENST00000619323 491 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.95□□□□□ -1.3
LIMK2P53671 AC120057.5-201ENST00000623840 154 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.95□□□□□ -1.3
LIMK2P53671 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.95□□□□□ -1.3
LIMK2P53671 AL354702.2-202ENST00000641481 890 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.95□□□□□ -1.3
LIMK2P53671 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.95□□□□□ -1.3
LIMK2P53671 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
LIMK2P53671 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
LIMK2P53671 AC119674.1-204ENST00000641348 1343 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 AL596244.1-201ENST00000567068 3779 ntBASIC6.95□□□□□ -1.3
LIMK2P53671 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIMK2P53671 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIMK2P53671 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIMK2P53671 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
LIMK2P53671 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIMK2P53671 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIMK2P53671 AC129502.1-201ENST00000623261 1654 ntBASIC6.94□□□□□ -1.3
LIMK2P53671 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIMK2P53671 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
LIMK2P53671 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.94□□□□□ -1.3
LIMK2P53671 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.94□□□□□ -1.3
LIMK2P53671 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.94□□□□□ -1.3
LIMK2P53671 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIMK2P53671 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.94□□□□□ -1.3
LIMK2P53671 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.94□□□□□ -1.3
LIMK2P53671 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
LIMK2P53671 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIMK2P53671 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIMK2P53671 RNA5SP53-201ENST00000391299 120 ntBASIC6.94□□□□□ -1.3
LIMK2P53671 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
LIMK2P53671 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
LIMK2P53671 PDCL3P5-201ENST00000398028 722 ntBASIC6.94□□□□□ -1.3
LIMK2P53671 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.94□□□□□ -1.3
LIMK2P53671 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIMK2P53671 PUDPP2-201ENST00000431423 643 ntBASIC6.94□□□□□ -1.3
LIMK2P53671 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.94□□□□□ -1.3
LIMK2P53671 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.94□□□□□ -1.3
LIMK2P53671 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.94□□□□□ -1.3
LIMK2P53671 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.94□□□□□ -1.3
LIMK2P53671 MED28P7-201ENST00000456611 530 ntBASIC6.94□□□□□ -1.3
LIMK2P53671 AC079193.1-201ENST00000460497 588 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms