Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.25□□□□□ -1.25
LHX1P48742 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.25□□□□□ -1.25
LHX1P48742 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.25□□□□□ -1.25
LHX1P48742 AC006509.1-201ENST00000420788 634 ntBASIC7.25□□□□□ -1.25
LHX1P48742 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.25□□□□□ -1.25
LHX1P48742 PAICSP2-201ENST00000429118 1150 ntBASIC7.25□□□□□ -1.25
LHX1P48742 AL590128.1-201ENST00000433407 286 ntBASIC7.25□□□□□ -1.25
LHX1P48742 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.25□□□□□ -1.25
LHX1P48742 AC083855.1-201ENST00000440041 258 ntBASIC7.25□□□□□ -1.25
LHX1P48742 SNRPBP1-201ENST00000443634 282 ntBASIC7.25□□□□□ -1.25
LHX1P48742 AL121578.2-201ENST00000448797 447 ntBASIC7.25□□□□□ -1.25
LHX1P48742 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.25□□□□□ -1.25
LHX1P48742 SUMO2P10-201ENST00000452006 288 ntBASIC7.25□□□□□ -1.25
LHX1P48742 AC073476.1-201ENST00000452854 407 ntBASIC7.25□□□□□ -1.25
LHX1P48742 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.25□□□□□ -1.25
LHX1P48742 AP003385.3-201ENST00000472498 287 ntBASIC7.25□□□□□ -1.25
LHX1P48742 PGBD4P1-201ENST00000473644 407 ntBASIC7.25□□□□□ -1.25
LHX1P48742 RN7SL70P-201ENST00000478322 302 ntBASIC7.25□□□□□ -1.25
LHX1P48742 RN7SL502P-201ENST00000481857 290 ntBASIC7.25□□□□□ -1.25
LHX1P48742 RN7SL612P-201ENST00000497704 295 ntBASIC7.25□□□□□ -1.25
LHX1P48742 AC114324.2-202ENST00000503812 134 ntBASIC7.25□□□□□ -1.25
LHX1P48742 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.25□□□□□ -1.25
LHX1P48742 OR9L1P-201ENST00000529493 933 ntBASIC7.25□□□□□ -1.25
LHX1P48742 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
LHX1P48742 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.25□□□□□ -1.25
LHX1P48742 AC036176.3-201ENST00000602456 418 ntBASIC7.25□□□□□ -1.25
LHX1P48742 AC025287.2-201ENST00000621911 668 ntBASIC7.25□□□□□ -1.25
LHX1P48742 AC006328.2-201ENST00000623198 397 ntBASIC7.25□□□□□ -1.25
LHX1P48742 AC012005.2-201ENST00000624333 397 ntBASIC7.25□□□□□ -1.25
LHX1P48742 SNORA16A-202ENST00000628458 135 ntBASIC7.25□□□□□ -1.25
LHX1P48742 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.25□□□□□ -1.25
LHX1P48742 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
LHX1P48742 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.24□□□□□ -1.25
LHX1P48742 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX1P48742 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX1P48742 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.24□□□□□ -1.25
LHX1P48742 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
LHX1P48742 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.24□□□□□ -1.25
LHX1P48742 AL663061.1-201ENST00000416625 580 ntBASIC7.24□□□□□ -1.25
LHX1P48742 AL589794.1-201ENST00000424971 390 ntBASIC7.24□□□□□ -1.25
LHX1P48742 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.24□□□□□ -1.25
LHX1P48742 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX1P48742 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.24□□□□□ -1.25
LHX1P48742 AL356121.1-201ENST00000442911 156 ntBASIC7.24□□□□□ -1.25
LHX1P48742 AC133965.1-201ENST00000452984 354 ntBASIC7.24□□□□□ -1.25
LHX1P48742 OR13C1P-201ENST00000457612 963 ntBASIC7.24□□□□□ -1.25
LHX1P48742 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.24□□□□□ -1.25
LHX1P48742 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.24□□□□□ -1.25
LHX1P48742 AC021074.2-201ENST00000468434 172 ntBASIC7.24□□□□□ -1.25
LHX1P48742 RN7SL259P-201ENST00000478499 253 ntBASIC7.24□□□□□ -1.25
LHX1P48742 RN7SL382P-201ENST00000482631 282 ntBASIC7.24□□□□□ -1.25
LHX1P48742 AC074386.1-206ENST00000487102 761 ntBASIC7.24□□□□□ -1.25
LHX1P48742 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.24□□□□□ -1.25
LHX1P48742 MRPL57P6-201ENST00000506570 309 ntBASIC7.24□□□□□ -1.25
LHX1P48742 AC139713.1-202ENST00000512366 460 ntBASIC7.24□□□□□ -1.25
LHX1P48742 RN7SKP196-201ENST00000516267 345 ntBASIC7.24□□□□□ -1.25
LHX1P48742 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
LHX1P48742 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.24□□□□□ -1.25
LHX1P48742 SNRPCP6-201ENST00000528310 210 ntBASIC7.24□□□□□ -1.25
LHX1P48742 AC084851.2-201ENST00000530377 364 ntBASIC7.24□□□□□ -1.25
LHX1P48742 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.24□□□□□ -1.25
LHX1P48742 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.24□□□□□ -1.25
LHX1P48742 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.24□□□□□ -1.25
LHX1P48742 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.24□□□□□ -1.25
LHX1P48742 AC140063.1-201ENST00000541343 259 ntBASIC7.24□□□□□ -1.25
LHX1P48742 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.24□□□□□ -1.25
LHX1P48742 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.24□□□□□ -1.25
LHX1P48742 AL591767.3-201ENST00000554632 525 ntBASIC7.24□□□□□ -1.25
LHX1P48742 FXNP1-201ENST00000555153 337 ntBASIC7.24□□□□□ -1.25
LHX1P48742 OR4C49P-201ENST00000563891 900 ntBASIC7.24□□□□□ -1.25
LHX1P48742 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.24□□□□□ -1.25
LHX1P48742 SNORA70D-201ENST00000578836 135 ntBASIC7.24□□□□□ -1.25
LHX1P48742 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX1P48742 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX1P48742 AL034408.1-201ENST00000637712 664 ntBASIC7.24□□□□□ -1.25
LHX1P48742 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.24□□□□□ -1.25
LHX1P48742 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX1P48742 AL034417.4-202ENST00000642135 2236 ntBASIC7.24□□□□□ -1.25
LHX1P48742 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.24□□□□□ -1.25
LHX1P48742 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.24□□□□□ -1.25
LHX1P48742 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.24□□□□□ -1.25
LHX1P48742 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LHX1P48742 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
LHX1P48742 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms