Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 AL161742.1-201ENST00000418154 584 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 LSM3P3-201ENST00000436601 306 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 AC009237.4-201ENST00000441078 238 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 PMS2P9-201ENST00000441237 515 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 RPS19P6-201ENST00000441327 433 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 RPS4XP19-201ENST00000460237 736 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 AC079594.1-201ENST00000489757 331 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 MTND6P8-201ENST00000503471 522 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 OR10J9P-201ENST00000511932 987 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 RNU2-45P-201ENST00000516068 187 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 OR4C1P-201ENST00000530880 937 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DMBP28068 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DMBP28068 ACTG1P15-201ENST00000570019 1063 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 AC061975.3-201ENST00000583209 244 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 MIR3159-201ENST00000584572 74 ntBASIC5.27□□□□□ -1.57
HLA-DMBP28068 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DMBP28068 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DMBP28068 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DMBP28068 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 VN2R1P-201ENST00000449668 1743 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 CA10-204ENST00000570565 2276 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 AC023886.2-201ENST00000321285 411 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 RNA5SP442-201ENST00000365050 107 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 U3.14-201ENST00000365363 227 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 MIR27A-201ENST00000385073 78 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 DBIL5P2-201ENST00000443827 253 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 OR5M4P-201ENST00000529436 925 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 AP004607.5-201ENST00000532034 217 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 AC024085.1-201ENST00000604299 432 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 AC005070.2-201ENST00000604391 260 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 CYCSP1-201ENST00000604815 315 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 AC012640.3-201ENST00000607847 430 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 Z93930.3-201ENST00000607919 749 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 AC016542.3-201ENST00000623520 619 ntBASIC5.26□□□□□ -1.57
HLA-DMBP28068 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
HLA-DMBP28068 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DMBP28068 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 AC122713.2-201ENST00000624942 3335 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms