Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 RPL23AP23-201ENST00000452590 471 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AL109741.2-201ENST00000455561 343 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 RN7SL630P-201ENST00000483714 297 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 RPS6P4-201ENST00000494693 758 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC005178.1-201ENST00000508392 440 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC046134.1-201ENST00000514454 666 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 IGHVII-30-1-201ENST00000522218 301 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 MED28P5-201ENST00000528254 438 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 OR6C7P-201ENST00000547875 934 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC008147.3-201ENST00000548666 354 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC104229.1-201ENST00000561364 255 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 RPL7L1P5-201ENST00000590816 738 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AL162574.1-201ENST00000615702 950 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AL121873.1-201ENST00000616013 524 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 FER-210ENST00000628534 558 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 LINC02291-201ENST00000355909 1670 ntTSL 2 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 NF1P1-201ENST00000604105 2645 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 BMS1P1-201ENST00000374336 1332 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AP001528.3-201ENST00000624364 3249 ntBASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 USP3-208ENST00000558285 1742 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CUEDC1Q9NWM3 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 AC010132.4-201ENST00000569883 1368 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 R3HDM2-207ENST00000441731 4076 ntTSL 5 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 RETNLB-201ENST00000295755 676 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 MIR425-201ENST00000362162 87 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 RNU6-224P-201ENST00000384055 107 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 Y_RNA.560-201ENST00000384689 102 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 CNN2P7-201ENST00000400583 932 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 RN7SKP166-201ENST00000410812 305 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 RN7SKP136-201ENST00000410927 300 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 BTF3L4P3-201ENST00000418879 476 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 FNDC3CP-201ENST00000420795 1155 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 LINC01363-201ENST00000426709 971 ntTSL 5 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 ARPC3P1-201ENST00000437218 533 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 COX7BP2-201ENST00000437976 242 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 YWHABP1-201ENST00000445359 727 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 NANOGNBP1-201ENST00000448444 480 ntBASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC8.22□□□□□ -1.09
CUEDC1Q9NWM3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms