Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 RPL36P18-201ENST00000419316 318 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 PA2G4P1-201ENST00000442248 1197 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 PPIAP32-201ENST00000449940 472 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 RPS26P11-201ENST00000463445 348 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AP000805.1-201ENST00000471604 784 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 RPS26P6-201ENST00000475156 348 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 MINOS1P4-201ENST00000515470 318 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 MRPS5P3-201ENST00000515577 166 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 RN7SKP98-201ENST00000517070 156 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 ACTG1P15-201ENST00000570019 1063 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AL121583.1-201ENST00000612444 682 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 MRPL57P3-201ENST00000619218 176 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 Z93929.1-201ENST00000418200 1475 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 MAPK10-323ENST00000641493 3207 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AC129502.1-201ENST00000623261 1654 ntBASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.45□□□□□ -1.38
H3F3CQ6NXT2 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 ATP5BP1-201ENST00000411980 1574 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 RN7SKP191-201ENST00000364713 306 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 RPL5P5-201ENST00000392009 893 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 RBBP4P4-201ENST00000398588 1289 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AL034417.1-201ENST00000399343 800 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AL079341.1-201ENST00000404701 1207 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 RPSAP60-201ENST00000415403 880 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AP003385.1-201ENST00000426387 893 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 RPL5P34-201ENST00000426545 891 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 ETF1P1-206ENST00000427296 984 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 PSMD8P1-201ENST00000436275 769 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 E2F6P3-201ENST00000441743 743 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 WDR82P2-201ENST00000444540 928 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 RPL5P9-201ENST00000448118 886 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 RPL31P11-202ENST00000454082 372 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AC010878.1-201ENST00000456500 1047 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 MRPL57P6-201ENST00000506570 309 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AC137549.1-201ENST00000514243 533 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AP005902.2-201ENST00000518393 307 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AC244034.2-201ENST00000562504 509 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 PRELID3BP3-201ENST00000584963 545 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AP005329.3-201ENST00000609924 686 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AP005212.3-201ENST00000619964 528 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 TPTE2P2-201ENST00000403471 1466 ntBASIC6.44□□□□□ -1.38
H3F3CQ6NXT2 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms