Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC5.26□□□□□ -1.57
Cln3Q61124 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.26□□□□□ -1.57
Cln3Q61124 Gm37713-201ENSMUST00000191746 198 ntBASIC5.26□□□□□ -1.57
Cln3Q61124 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC5.26□□□□□ -1.57
Cln3Q61124 Gm43749-201ENSMUST00000199345 352 ntBASIC5.26□□□□□ -1.57
Cln3Q61124 AC188459.1-201ENSMUST00000216651 300 ntBASIC5.26□□□□□ -1.57
Cln3Q61124 Gm25078-201ENSMUST00000082530 107 ntBASIC5.26□□□□□ -1.57
Cln3Q61124 Snord82-201ENSMUST00000082889 70 ntBASIC5.26□□□□□ -1.57
Cln3Q61124 Gm23932-201ENSMUST00000082914 107 ntBASIC5.26□□□□□ -1.57
Cln3Q61124 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cln3Q61124 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cln3Q61124 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cln3Q61124 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Cln3Q61124 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cln3Q61124 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cln3Q61124 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cln3Q61124 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cln3Q61124 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cln3Q61124 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.25□□□□□ -1.57
Cln3Q61124 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cln3Q61124 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cln3Q61124 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Cln3Q61124 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cln3Q61124 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cln3Q61124 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cln3Q61124 Gm22493-201ENSMUST00000104494 132 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm23990-201ENSMUST00000117031 117 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm14803-201ENSMUST00000117163 361 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm12125-201ENSMUST00000117261 736 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.25□□□□□ -1.57
Cln3Q61124 Gm6265-201ENSMUST00000149263 231 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cln3Q61124 Gm24006-201ENSMUST00000158462 132 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm17187-201ENSMUST00000164622 410 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cln3Q61124 Gm27476-201ENSMUST00000183366 104 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Mir6414-201ENSMUST00000183685 82 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm27285-201ENSMUST00000183875 127 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm28849-201ENSMUST00000188127 174 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm28330-201ENSMUST00000190353 171 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cln3Q61124 Gm32536-201ENSMUST00000205209 445 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm8319-201ENSMUST00000205708 641 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.25□□□□□ -1.57
Cln3Q61124 Gm3338-201ENSMUST00000220982 269 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm23300-201ENSMUST00000082712 125 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Gm22685-201ENSMUST00000082848 106 ntBASIC5.25□□□□□ -1.57
Cln3Q61124 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cln3Q61124 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cln3Q61124 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Cln3Q61124 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Cln3Q61124 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cln3Q61124 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.24□□□□□ -1.57
Cln3Q61124 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cln3Q61124 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Cln3Q61124 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cln3Q61124 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cln3Q61124 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cln3Q61124 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cln3Q61124 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC5.24□□□□□ -1.57
Cln3Q61124 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Cln3Q61124 Gm25595-201ENSMUST00000102273 97 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Mir19b-1-201ENSMUST00000102301 87 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cln3Q61124 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cln3Q61124 Gm11367-201ENSMUST00000117802 120 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.24□□□□□ -1.57
Cln3Q61124 Gm22211-201ENSMUST00000158097 156 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC5.24□□□□□ -1.57
Cln3Q61124 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.24□□□□□ -1.57
Cln3Q61124 Gm9402-201ENSMUST00000196849 388 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC5.24□□□□□ -1.57
Cln3Q61124 Gm6842-201ENSMUST00000211361 390 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Gm16419-201ENSMUST00000221057 625 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 CT485608.1-201ENSMUST00000228759 389 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Gm23464-201ENSMUST00000083145 147 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Gm23677-201ENSMUST00000083156 104 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Gm23099-201ENSMUST00000083454 139 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC5.24□□□□□ -1.57
Cln3Q61124 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cln3Q61124 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cln3Q61124 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cln3Q61124 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Cln3Q61124 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
Cln3Q61124 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.24□□□□□ -1.57
Cln3Q61124 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Cln3Q61124 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cln3Q61124 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Cln3Q61124 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Cln3Q61124 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Cln3Q61124 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Cln3Q61124 CT025577.1-201ENSMUST00000220862 2846 ntBASIC5.23□□□□□ -1.57
Cln3Q61124 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cln3Q61124 Gm11325-201ENSMUST00000119967 469 ntBASIC5.23□□□□□ -1.57
Cln3Q61124 Gm13581-201ENSMUST00000120675 278 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms