Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.29□□□□□ -1.24
LHX1P48742 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.29□□□□□ -1.24
LHX1P48742 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
LHX1P48742 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
LHX1P48742 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
LHX1P48742 AC092634.1-201ENST00000366505 199 ntBASIC7.29□□□□□ -1.24
LHX1P48742 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.29□□□□□ -1.24
LHX1P48742 RPSAP60-201ENST00000415403 880 ntBASIC7.29□□□□□ -1.24
LHX1P48742 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.29□□□□□ -1.24
LHX1P48742 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.29□□□□□ -1.24
LHX1P48742 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.29□□□□□ -1.24
LHX1P48742 GAPDHP57-201ENST00000424400 585 ntBASIC7.29□□□□□ -1.24
LHX1P48742 MORF4L1P5-201ENST00000433352 961 ntBASIC7.29□□□□□ -1.24
LHX1P48742 PSMD8P1-201ENST00000436275 769 ntBASIC7.29□□□□□ -1.24
LHX1P48742 AC234771.4-201ENST00000441416 730 ntBASIC7.29□□□□□ -1.24
LHX1P48742 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.29□□□□□ -1.24
LHX1P48742 E2F6P3-201ENST00000441743 743 ntBASIC7.29□□□□□ -1.24
LHX1P48742 WDR82P2-201ENST00000444540 928 ntBASIC7.29□□□□□ -1.24
LHX1P48742 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.29□□□□□ -1.24
LHX1P48742 AC002486.2-201ENST00000447806 590 ntBASIC7.29□□□□□ -1.24
LHX1P48742 AC022080.2-201ENST00000452932 533 ntBASIC7.29□□□□□ -1.24
LHX1P48742 NPM1P9-201ENST00000453156 844 ntBASIC7.29□□□□□ -1.24
LHX1P48742 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.29□□□□□ -1.24
LHX1P48742 RN7SL143P-201ENST00000496780 297 ntBASIC7.29□□□□□ -1.24
LHX1P48742 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.29□□□□□ -1.24
LHX1P48742 AC021220.1-201ENST00000507445 630 ntBASIC7.29□□□□□ -1.24
LHX1P48742 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.29□□□□□ -1.24
LHX1P48742 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.29□□□□□ -1.24
LHX1P48742 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.29□□□□□ -1.24
LHX1P48742 GTF2IP6-201ENST00000583143 541 ntBASIC7.29□□□□□ -1.24
LHX1P48742 AL590032.1-201ENST00000604920 252 ntBASIC7.29□□□□□ -1.24
LHX1P48742 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 AL138693.1-201ENST00000622219 129 ntBASIC7.29□□□□□ -1.24
LHX1P48742 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
LHX1P48742 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.29□□□□□ -1.24
LHX1P48742 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
LHX1P48742 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.29□□□□□ -1.24
LHX1P48742 VN2R1P-201ENST00000449668 1743 ntBASIC7.29□□□□□ -1.24
LHX1P48742 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.29□□□□□ -1.24
LHX1P48742 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 AC138915.4-201ENST00000565549 4147 ntBASIC7.29□□□□□ -1.24
LHX1P48742 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LHX1P48742 AL451064.2-201ENST00000623514 1654 ntBASIC7.28□□□□□ -1.24
LHX1P48742 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX1P48742 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX1P48742 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.28□□□□□ -1.24
LHX1P48742 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.28□□□□□ -1.24
LHX1P48742 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
LHX1P48742 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX1P48742 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX1P48742 AC015871.3-201ENST00000618835 2261 ntBASIC7.28□□□□□ -1.24
LHX1P48742 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX1P48742 RNA5SP474-201ENST00000391234 90 ntBASIC7.28□□□□□ -1.24
LHX1P48742 AC026310.1-201ENST00000396004 378 ntBASIC7.28□□□□□ -1.24
LHX1P48742 ARSFP1-201ENST00000398758 477 ntBASIC7.28□□□□□ -1.24
LHX1P48742 AL353133.1-201ENST00000407695 401 ntBASIC7.28□□□□□ -1.24
LHX1P48742 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.28□□□□□ -1.24
LHX1P48742 RN7SKP271-201ENST00000410528 320 ntBASIC7.28□□□□□ -1.24
LHX1P48742 SPATA20P1-201ENST00000423089 438 ntBASIC7.28□□□□□ -1.24
LHX1P48742 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.28□□□□□ -1.24
LHX1P48742 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LHX1P48742 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.28□□□□□ -1.24
LHX1P48742 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.28□□□□□ -1.24
LHX1P48742 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LHX1P48742 RPL5P33-201ENST00000487833 905 ntBASIC7.28□□□□□ -1.24
LHX1P48742 RN7SL187P-201ENST00000495587 303 ntBASIC7.28□□□□□ -1.24
LHX1P48742 NREP-217ENST00000509025 987 ntTSL 3 BASIC7.28□□□□□ -1.24
LHX1P48742 AC010442.1-201ENST00000515583 816 ntBASIC7.28□□□□□ -1.24
LHX1P48742 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.28□□□□□ -1.24
LHX1P48742 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC7.28□□□□□ -1.24
LHX1P48742 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.28□□□□□ -1.24
LHX1P48742 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.28□□□□□ -1.24
LHX1P48742 AP006587.5-201ENST00000532033 739 ntBASIC7.28□□□□□ -1.24
LHX1P48742 SETP17-201ENST00000534163 817 ntBASIC7.28□□□□□ -1.24
LHX1P48742 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.28□□□□□ -1.24
LHX1P48742 AC016144.1-201ENST00000548175 1087 ntBASIC7.28□□□□□ -1.24
LHX1P48742 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.28□□□□□ -1.24
LHX1P48742 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC7.28□□□□□ -1.24
LHX1P48742 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.28□□□□□ -1.24
LHX1P48742 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.28□□□□□ -1.24
LHX1P48742 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LHX1P48742 MIR6849-201ENST00000618543 69 ntBASIC7.28□□□□□ -1.24
LHX1P48742 AC127071.2-201ENST00000623293 527 ntBASIC7.28□□□□□ -1.24
LHX1P48742 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
LHX1P48742 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.28□□□□□ -1.24
LHX1P48742 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.28□□□□□ -1.24
LHX1P48742 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.28□□□□□ -1.24
LHX1P48742 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LHX1P48742 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LHX1P48742 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms