Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.25□□□□□ -1.57
CXCL1P09341 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 KYNUP1-201ENST00000466683 1406 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CXCL1P09341 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC5.25□□□□□ -1.57
CXCL1P09341 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CXCL1P09341 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 NPM1P14-201ENST00000343743 866 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
CXCL1P09341 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 CES5AP1-201ENST00000400418 859 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 AC096537.2-201ENST00000413707 714 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 DHRS9-203ENST00000421653 1044 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 RBMY2YP-201ENST00000423333 912 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 GAPDHP73-201ENST00000423411 1007 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC5.25□□□□□ -1.57
CXCL1P09341 MED15P9-201ENST00000424716 533 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL1P09341 RPL26P34-201ENST00000431005 451 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 CLUHP5-201ENST00000438421 774 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 RPS29P5-201ENST00000452777 171 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 TUBB4BP2-201ENST00000454125 798 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 AL139156.3-201ENST00000454802 394 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 SULT1D1P-201ENST00000458020 882 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 MARK2P8-201ENST00000476069 952 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 AC117395.1-201ENST00000487390 403 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL1P09341 AC008677.3-201ENST00000519146 666 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 AP005639.1-201ENST00000526939 192 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC5.25□□□□□ -1.57
CXCL1P09341 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL1P09341 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL1P09341 DCN-207ENST00000546370 586 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL1P09341 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.25□□□□□ -1.57
CXCL1P09341 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL1P09341 OR5AH1P-201ENST00000595968 283 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 AL078623.1-201ENST00000602702 907 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC5.25□□□□□ -1.57
CXCL1P09341 OR13Z2P-201ENST00000606338 555 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 OR6L2P-201ENST00000608207 925 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 RPL36AP21-202ENST00000639134 430 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.25□□□□□ -1.57
CXCL1P09341 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
CXCL1P09341 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 ZNF101P1-201ENST00000435701 1720 ntBASIC5.25□□□□□ -1.57
CXCL1P09341 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL1P09341 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL1P09341 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CXCL1P09341 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.24□□□□□ -1.57
CXCL1P09341 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.24□□□□□ -1.57
CXCL1P09341 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CXCL1P09341 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.24□□□□□ -1.57
CXCL1P09341 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CXCL1P09341 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CXCL1P09341 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CXCL1P09341 RNA5SP172-201ENST00000365061 118 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.24□□□□□ -1.57
CXCL1P09341 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CXCL1P09341 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC5.24□□□□□ -1.57
CXCL1P09341 RPL19P21-201ENST00000424919 591 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL1P09341 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
CXCL1P09341 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL1P09341 RPL5P27-201ENST00000437011 881 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 CDC42P2-201ENST00000448566 569 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL1P09341 AC007000.1-201ENST00000453064 794 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL1P09341 RPL10P6-201ENST00000457497 318 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL1P09341 AC090058.1-201ENST00000498788 435 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 MRPL57P6-201ENST00000506570 309 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms