Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
APOEP02649 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
APOEP02649 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.3□□□□□ -1.24
APOEP02649 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
APOEP02649 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
APOEP02649 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.29□□□□□ -1.24
APOEP02649 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC7.29□□□□□ -1.24
APOEP02649 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
APOEP02649 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.29□□□□□ -1.24
APOEP02649 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 RN7SKP62-201ENST00000384539 329 ntBASIC7.29□□□□□ -1.24
APOEP02649 MIR138-2-201ENST00000384916 84 ntBASIC7.29□□□□□ -1.24
APOEP02649 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 AL359715.1-201ENST00000404330 555 ntBASIC7.29□□□□□ -1.24
APOEP02649 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.29□□□□□ -1.24
APOEP02649 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.29□□□□□ -1.24
APOEP02649 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.29□□□□□ -1.24
APOEP02649 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 AC009303.1-201ENST00000426307 352 ntBASIC7.29□□□□□ -1.24
APOEP02649 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
APOEP02649 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.29□□□□□ -1.24
APOEP02649 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
APOEP02649 RN7SL834P-201ENST00000461450 286 ntBASIC7.29□□□□□ -1.24
APOEP02649 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.29□□□□□ -1.24
APOEP02649 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC7.29□□□□□ -1.24
APOEP02649 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.29□□□□□ -1.24
APOEP02649 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 RN7SL426P-201ENST00000579106 295 ntBASIC7.29□□□□□ -1.24
APOEP02649 MIR5682-201ENST00000584864 76 ntBASIC7.29□□□□□ -1.24
APOEP02649 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.29□□□□□ -1.24
APOEP02649 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.29□□□□□ -1.24
APOEP02649 AC005753.1-201ENST00000623837 618 ntBASIC7.29□□□□□ -1.24
APOEP02649 AC006453.3-201ENST00000635891 377 ntBASIC7.29□□□□□ -1.24
APOEP02649 AC140479.4-205ENST00000636339 820 ntBASIC7.29□□□□□ -1.24
APOEP02649 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
APOEP02649 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.29□□□□□ -1.24
APOEP02649 AC020978.6-201ENST00000571197 3177 ntBASIC7.29□□□□□ -1.24
APOEP02649 RAD17P2-201ENST00000451754 1977 ntBASIC7.29□□□□□ -1.24
APOEP02649 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 MROH3P-201ENST00000435735 2676 ntBASIC7.29□□□□□ -1.24
APOEP02649 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 MAPK10-365ENST00000641902 3825 ntBASIC7.29□□□□□ -1.24
APOEP02649 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.29□□□□□ -1.24
APOEP02649 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
APOEP02649 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
APOEP02649 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
APOEP02649 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.28□□□□□ -1.24
APOEP02649 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 AC092821.3-202ENST00000641304 2767 ntBASIC7.28□□□□□ -1.24
APOEP02649 AC022507.1-201ENST00000548349 1505 ntBASIC7.28□□□□□ -1.24
APOEP02649 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.28□□□□□ -1.24
APOEP02649 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.28□□□□□ -1.24
APOEP02649 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
APOEP02649 MRPL32P1-201ENST00000406301 247 ntBASIC7.28□□□□□ -1.24
APOEP02649 AL451061.1-201ENST00000407887 862 ntBASIC7.28□□□□□ -1.24
APOEP02649 RPS21P8-201ENST00000413365 247 ntBASIC7.28□□□□□ -1.24
APOEP02649 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.28□□□□□ -1.24
APOEP02649 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.28□□□□□ -1.24
APOEP02649 MYL6P3-201ENST00000436904 432 ntBASIC7.28□□□□□ -1.24
APOEP02649 RPS10P14-201ENST00000440748 502 ntBASIC7.28□□□□□ -1.24
APOEP02649 AL356133.1-201ENST00000444762 372 ntBASIC7.28□□□□□ -1.24
APOEP02649 OR51P1P-201ENST00000447547 942 ntBASIC7.28□□□□□ -1.24
APOEP02649 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.28□□□□□ -1.24
APOEP02649 SLAMF6P1-201ENST00000451067 602 ntBASIC7.28□□□□□ -1.24
APOEP02649 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.28□□□□□ -1.24
APOEP02649 OR7E7P-201ENST00000455678 1012 ntBASIC7.28□□□□□ -1.24
APOEP02649 RBMY2EP-202ENST00000456360 940 ntBASIC7.28□□□□□ -1.24
APOEP02649 AC010878.1-201ENST00000456500 1047 ntBASIC7.28□□□□□ -1.24
APOEP02649 EIF3LP2-201ENST00000457262 807 ntBASIC7.28□□□□□ -1.24
APOEP02649 TREML3P-201ENST00000457327 501 ntBASIC7.28□□□□□ -1.24
APOEP02649 AC131233.1-201ENST00000479200 955 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 442.3 ms