Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 OR7E117P-201ENST00000422682 1112 ntBASIC7.4□□□□□ -1.22
NEK3P51956 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.4□□□□□ -1.22
NEK3P51956 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.4□□□□□ -1.22
NEK3P51956 CYP4F34P-201ENST00000425951 481 ntBASIC7.4□□□□□ -1.22
NEK3P51956 RPL34P27-201ENST00000428810 349 ntBASIC7.4□□□□□ -1.22
NEK3P51956 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.4□□□□□ -1.22
NEK3P51956 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.4□□□□□ -1.22
NEK3P51956 AC245047.1-201ENST00000433276 873 ntBASIC7.4□□□□□ -1.22
NEK3P51956 MAPRE1P3-201ENST00000435438 796 ntBASIC7.4□□□□□ -1.22
NEK3P51956 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.4□□□□□ -1.22
NEK3P51956 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.4□□□□□ -1.22
NEK3P51956 AC019080.2-201ENST00000453859 394 ntBASIC7.4□□□□□ -1.22
NEK3P51956 RPS14P7-201ENST00000473701 448 ntBASIC7.4□□□□□ -1.22
NEK3P51956 AC025181.1-201ENST00000477507 416 ntBASIC7.4□□□□□ -1.22
NEK3P51956 OR7E163P-201ENST00000505943 894 ntBASIC7.4□□□□□ -1.22
NEK3P51956 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.4□□□□□ -1.22
NEK3P51956 AC233290.1-201ENST00000553021 1186 ntBASIC7.4□□□□□ -1.22
NEK3P51956 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
NEK3P51956 RPS7P1-201ENST00000571702 585 ntBASIC7.4□□□□□ -1.22
NEK3P51956 NPM1P45-201ENST00000583151 559 ntBASIC7.4□□□□□ -1.22
NEK3P51956 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.4□□□□□ -1.22
NEK3P51956 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.4□□□□□ -1.22
NEK3P51956 AC012510.1-201ENST00000607946 759 ntBASIC7.4□□□□□ -1.22
NEK3P51956 OR7M1P-201ENST00000608946 533 ntBASIC7.4□□□□□ -1.22
NEK3P51956 AC116165.3-201ENST00000614524 400 ntBASIC7.4□□□□□ -1.22
NEK3P51956 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NEK3P51956 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NEK3P51956 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NEK3P51956 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.4□□□□□ -1.22
NEK3P51956 AC090220.1-201ENST00000593078 1699 ntBASIC7.4□□□□□ -1.23
NEK3P51956 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NEK3P51956 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NEK3P51956 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NEK3P51956 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
NEK3P51956 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NEK3P51956 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
NEK3P51956 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NEK3P51956 MAPK10-383ENST00000642032 3390 ntBASIC7.4□□□□□ -1.23
NEK3P51956 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
NEK3P51956 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.4□□□□□ -1.23
NEK3P51956 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
NEK3P51956 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.39□□□□□ -1.23
NEK3P51956 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
NEK3P51956 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.39□□□□□ -1.23
NEK3P51956 TMEM75-201ENST00000624314 2165 ntBASIC7.39□□□□□ -1.23
NEK3P51956 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.39□□□□□ -1.23
NEK3P51956 CDY7P-201ENST00000429883 1604 ntBASIC7.39□□□□□ -1.23
NEK3P51956 CR382285.2-201ENST00000624662 1495 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AC125232.1-201ENST00000452554 1408 ntBASIC7.39□□□□□ -1.23
NEK3P51956 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
NEK3P51956 AC023886.2-201ENST00000321285 411 ntBASIC7.39□□□□□ -1.23
NEK3P51956 RNA5SP218-201ENST00000363188 109 ntBASIC7.39□□□□□ -1.23
NEK3P51956 RNU6-670P-201ENST00000364312 104 ntBASIC7.39□□□□□ -1.23
NEK3P51956 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NEK3P51956 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 RBBP4P4-201ENST00000398588 1289 ntBASIC7.39□□□□□ -1.23
NEK3P51956 NPM1P38-201ENST00000403835 865 ntBASIC7.39□□□□□ -1.23
NEK3P51956 RNA5SP177-201ENST00000410122 107 ntBASIC7.39□□□□□ -1.23
NEK3P51956 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 AC007064.3-201ENST00000422608 359 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AJ239321.1-201ENST00000424255 564 ntBASIC7.39□□□□□ -1.23
NEK3P51956 FDPSP1-201ENST00000424976 1071 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AL731892.1-201ENST00000437364 1192 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.39□□□□□ -1.23
NEK3P51956 AC079781.1-201ENST00000441505 394 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC7.39□□□□□ -1.23
NEK3P51956 CEACAMP5-201ENST00000448037 961 ntBASIC7.39□□□□□ -1.23
NEK3P51956 TUBBP11-201ENST00000472255 252 ntBASIC7.39□□□□□ -1.23
NEK3P51956 RPS10P28-201ENST00000480396 498 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AC016687.1-201ENST00000482574 353 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AC066616.1-201ENST00000486795 413 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.39□□□□□ -1.23
NEK3P51956 CASP1P2-201ENST00000526830 1258 ntBASIC7.39□□□□□ -1.23
NEK3P51956 OR5M4P-201ENST00000529436 925 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC7.39□□□□□ -1.23
NEK3P51956 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.39□□□□□ -1.23
NEK3P51956 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.39□□□□□ -1.23
NEK3P51956 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC7.39□□□□□ -1.23
NEK3P51956 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
NEK3P51956 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.39□□□□□ -1.23
NEK3P51956 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.39□□□□□ -1.23
NEK3P51956 AC097376.1-201ENST00000602907 997 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AC097381.3-201ENST00000608962 462 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AP005329.3-201ENST00000609924 686 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AL354696.1-201ENST00000614652 497 ntBASIC7.39□□□□□ -1.23
NEK3P51956 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.39□□□□□ -1.23
NEK3P51956 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NEK3P51956 AC022743.1-201ENST00000624990 664 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.39□□□□□ -1.23
NEK3P51956 AL590396.3-201ENST00000636334 300 ntBASIC7.39□□□□□ -1.23
NEK3P51956 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.39□□□□□ -1.23
NEK3P51956 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.39□□□□□ -1.23
NEK3P51956 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NEK3P51956 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms