Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AC024937.2-201ENST00000411669 1242 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.55□□□□□ -1.2
UBE4BO95155 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.55□□□□□ -1.2
UBE4BO95155 AL161742.1-201ENST00000418154 584 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE4BO95155 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE4BO95155 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
UBE4BO95155 OR52S1P-201ENST00000427016 937 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE4BO95155 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.55□□□□□ -1.2
UBE4BO95155 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE4BO95155 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.55□□□□□ -1.2
UBE4BO95155 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE4BO95155 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE4BO95155 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
UBE4BO95155 OR7E7P-201ENST00000455678 1012 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.55□□□□□ -1.2
UBE4BO95155 RN7SL187P-201ENST00000495587 303 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.55□□□□□ -1.2
UBE4BO95155 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC7.55□□□□□ -1.2
UBE4BO95155 AP004607.5-201ENST00000532034 217 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.55□□□□□ -1.2
UBE4BO95155 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
UBE4BO95155 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.55□□□□□ -1.2
UBE4BO95155 AC091932.1-201ENST00000569381 427 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE4BO95155 AC005753.1-201ENST00000623837 618 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 AL354702.2-202ENST00000641481 890 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
UBE4BO95155 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE4BO95155 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE4BO95155 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE4BO95155 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.55□□□□□ -1.2
UBE4BO95155 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE4BO95155 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
UBE4BO95155 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.55□□□□□ -1.2
UBE4BO95155 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE4BO95155 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE4BO95155 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
UBE4BO95155 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.55□□□□□ -1.2
UBE4BO95155 AP005139.1-201ENST00000580702 1647 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE4BO95155 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.55□□□□□ -1.2
UBE4BO95155 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.55□□□□□ -1.2
UBE4BO95155 AL139805.2-201ENST00000455305 2433 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE4BO95155 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UBE4BO95155 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE4BO95155 OR2A3P-202ENST00000641249 1776 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UBE4BO95155 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.54□□□□□ -1.2
UBE4BO95155 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.54□□□□□ -1.2
UBE4BO95155 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.54□□□□□ -1.2
UBE4BO95155 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.54□□□□□ -1.2
UBE4BO95155 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 RNA5SP65-201ENST00000363166 119 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 RNU1-24P-201ENST00000364285 165 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
UBE4BO95155 AC092646.1-201ENST00000427142 901 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 RPS7P4-201ENST00000444127 582 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.54□□□□□ -1.2
UBE4BO95155 RN7SL492P-201ENST00000460700 295 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 RPS16P9-201ENST00000477220 427 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 AC073648.3-201ENST00000504939 925 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC7.54□□□□□ -1.2
UBE4BO95155 MTCYBP44-201ENST00000514835 823 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 RNA5SP318-201ENST00000516352 92 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 AC092375.1-201ENST00000550410 637 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.54□□□□□ -1.2
UBE4BO95155 AC091304.4-201ENST00000565703 620 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.54□□□□□ -1.2
UBE4BO95155 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.54□□□□□ -1.2
UBE4BO95155 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.54□□□□□ -1.2
UBE4BO95155 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.54□□□□□ -1.2
UBE4BO95155 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.54□□□□□ -1.2
UBE4BO95155 AC009283.1-201ENST00000615852 645 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 AC025287.2-201ENST00000621911 668 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 AL034408.1-201ENST00000637712 664 ntBASIC7.54□□□□□ -1.2
UBE4BO95155 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
UBE4BO95155 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.54□□□□□ -1.2
UBE4BO95155 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
UBE4BO95155 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE4BO95155 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
UBE4BO95155 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.54□□□□□ -1.2
UBE4BO95155 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms