Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn3Q9Z0G9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Gm12085-201ENSMUST00000119263 940 ntBASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn3Q9Z0G9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.39■□□□□ 0.38
Cldn3Q9Z0G9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Cldn3Q9Z0G9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cldn3Q9Z0G9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.39■□□□□ 0.37
Cldn3Q9Z0G9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Odf3b-204ENSMUST00000227834 930 ntBASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn3Q9Z0G9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Gm37025-201ENSMUST00000195159 829 ntBASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn3Q9Z0G9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms