Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Nespas-201ENSMUST00000143738 1083 ntBASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Gm6365-201ENSMUST00000054711 744 ntBASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Gm4968-201ENSMUST00000071458 858 ntBASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb3Q91XZ7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Gm13148-201ENSMUST00000118892 745 ntBASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Gm19891-201ENSMUST00000189771 303 ntBASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb3Q91XZ7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb3Q91XZ7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb3Q91XZ7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms