Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Lsm1Q8VC85 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.51■□□□□ 0.23
Lsm1Q8VC85 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm1Q8VC85 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.51■□□□□ 0.23
Lsm1Q8VC85 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm1Q8VC85 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Gm42545-201ENSMUST00000202755 922 ntBASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm1Q8VC85 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.49■□□□□ 0.23
Lsm1Q8VC85 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm1Q8VC85 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm1Q8VC85 Haglr-201ENSMUST00000100000 2085 ntBASIC16.49■□□□□ 0.23
Lsm1Q8VC85 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm1Q8VC85 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm1Q8VC85 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm1Q8VC85 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm1Q8VC85 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lsm1Q8VC85 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm1Q8VC85 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm1Q8VC85 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Gm20049-201ENSMUST00000219950 730 ntBASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm1Q8VC85 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm1Q8VC85 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Gm13216-201ENSMUST00000117145 591 ntBASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Gm37292-201ENSMUST00000192062 758 ntBASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm1Q8VC85 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms