Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc116Q80X53 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.82■□□□□ 0.28
Ccdc116Q80X53 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Gm24841-201ENSMUST00000158676 357 ntBASIC16.82■□□□□ 0.28
Ccdc116Q80X53 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc116Q80X53 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.82■□□□□ 0.28
Ccdc116Q80X53 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc116Q80X53 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc116Q80X53 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Gm15378-201ENSMUST00000121894 207 ntBASIC16.79■□□□□ 0.28
Ccdc116Q80X53 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc116Q80X53 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc116Q80X53 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc116Q80X53 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc116Q80X53 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms