Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav2Q5R1I9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Gm16061-201ENSMUST00000122167 857 ntBASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Gm13474-201ENSMUST00000122466 815 ntBASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Gm7791-201ENSMUST00000219066 539 ntBASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav2Q5R1I9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Mir8112-201ENSMUST00000184382 131 ntBASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav2Q5R1I9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Gm10013-201ENSMUST00000106074 672 ntBASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Il3ra-202ENSMUST00000223589 738 ntBASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav2Q5R1I9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav2Q5R1I9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms