Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube2d3P61079 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.33□□□□□ -0.44
Ube2d3P61079 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube2d3P61079 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube2d3P61079 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube2d3P61079 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube2d3P61079 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube2d3P61079 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube2d3P61079 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube2d3P61079 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ube2d3P61079 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.33□□□□□ -0.44
Ube2d3P61079 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube2d3P61079 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube2d3P61079 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.32□□□□□ -0.44
Ube2d3P61079 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.32□□□□□ -0.44
Ube2d3P61079 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ube2d3P61079 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Ube2d3P61079 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ube2d3P61079 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ube2d3P61079 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.32□□□□□ -0.44
Ube2d3P61079 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Mir8112-201ENSMUST00000184382 131 ntBASIC12.32□□□□□ -0.44
Ube2d3P61079 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.32□□□□□ -0.44
Ube2d3P61079 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.32□□□□□ -0.44
Ube2d3P61079 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Ube2d3P61079 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube2d3P61079 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.31□□□□□ -0.44
Ube2d3P61079 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.31□□□□□ -0.44
Ube2d3P61079 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.31□□□□□ -0.44
Ube2d3P61079 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.31□□□□□ -0.44
Ube2d3P61079 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.31□□□□□ -0.44
Ube2d3P61079 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Gm11927-201ENSMUST00000118472 759 ntBASIC12.31□□□□□ -0.44
Ube2d3P61079 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.31□□□□□ -0.44
Ube2d3P61079 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ube2d3P61079 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Mir2861-201ENSMUST00000175539 82 ntBASIC12.31□□□□□ -0.44
Ube2d3P61079 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.31□□□□□ -0.44
Ube2d3P61079 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.31□□□□□ -0.44
Ube2d3P61079 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.31□□□□□ -0.44
Ube2d3P61079 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ube2d3P61079 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2d3P61079 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ube2d3P61079 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.3□□□□□ -0.44
Ube2d3P61079 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ube2d3P61079 Gm12933-201ENSMUST00000120203 872 ntBASIC12.3□□□□□ -0.44
Ube2d3P61079 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.3□□□□□ -0.44
Ube2d3P61079 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ube2d3P61079 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ube2d3P61079 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2d3P61079 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ube2d3P61079 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ube2d3P61079 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2d3P61079 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2d3P61079 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2d3P61079 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms