Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Foxa1P35582 Gm37055-201ENSMUST00000191866 133 ntBASIC15.92■□□□□ 0.14
Foxa1P35582 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.92■□□□□ 0.14
Foxa1P35582 Gm37025-201ENSMUST00000195159 829 ntBASIC15.92■□□□□ 0.14
Foxa1P35582 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.92■□□□□ 0.14
Foxa1P35582 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Foxa1P35582 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.92■□□□□ 0.14
Foxa1P35582 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Foxa1P35582 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Foxa1P35582 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Foxa1P35582 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Foxa1P35582 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Foxa1P35582 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.91■□□□□ 0.14
Foxa1P35582 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.91■□□□□ 0.14
Foxa1P35582 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Foxa1P35582 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Foxa1P35582 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Foxa1P35582 Gm7638-201ENSMUST00000121348 967 ntBASIC15.91■□□□□ 0.14
Foxa1P35582 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Foxa1P35582 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.91■□□□□ 0.14
Foxa1P35582 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Foxa1P35582 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Foxa1P35582 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Foxa1P35582 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Foxa1P35582 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Foxa1P35582 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Foxa1P35582 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Foxa1P35582 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Foxa1P35582 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Foxa1P35582 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.91■□□□□ 0.14
Foxa1P35582 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Foxa1P35582 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Foxa1P35582 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Foxa1P35582 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Foxa1P35582 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.89■□□□□ 0.13
Foxa1P35582 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.89■□□□□ 0.13
Foxa1P35582 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.89■□□□□ 0.13
Foxa1P35582 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Foxa1P35582 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.88■□□□□ 0.13
Foxa1P35582 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Foxa1P35582 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Foxa1P35582 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxa1P35582 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Foxa1P35582 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Foxa1P35582 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Foxa1P35582 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Foxa1P35582 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Foxa1P35582 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.87■□□□□ 0.13
Foxa1P35582 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms