Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Mmp13P33435 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Zfp783-201ENSMUST00000095946 670 ntBASIC17.63■□□□□ 0.41
Mmp13P33435 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Mmp13P33435 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Mmp13P33435 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.62■□□□□ 0.41
Mmp13P33435 Gm13158-201ENSMUST00000122007 736 ntBASIC17.62■□□□□ 0.41
Mmp13P33435 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.62■□□□□ 0.41
Mmp13P33435 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Mmp13P33435 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mmp13P33435 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Mmp13P33435 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.61■□□□□ 0.41
Mmp13P33435 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Mmp13P33435 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.61■□□□□ 0.41
Mmp13P33435 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.61■□□□□ 0.41
Mmp13P33435 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.61■□□□□ 0.41
Mmp13P33435 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Gm5643-201ENSMUST00000117081 966 ntBASIC17.6■□□□□ 0.41
Mmp13P33435 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.6■□□□□ 0.41
Mmp13P33435 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.6■□□□□ 0.41
Mmp13P33435 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Mmp13P33435 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.59■□□□□ 0.41
Mmp13P33435 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.59■□□□□ 0.41
Mmp13P33435 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Mmp13P33435 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.59■□□□□ 0.41
Mmp13P33435 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Mmp13P33435 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.59■□□□□ 0.41
Mmp13P33435 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp13P33435 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Mmp13P33435 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp13P33435 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp13P33435 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Gm10418-201ENSMUST00000100943 576 ntBASIC17.58■□□□□ 0.4
Mmp13P33435 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.58■□□□□ 0.4
Mmp13P33435 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.58■□□□□ 0.4
Mmp13P33435 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Mmp13P33435 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Mmp13P33435 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms