Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Mmp13P33435 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Zfp783-201ENSMUST00000095946 670 ntBASIC17.63■□□□□ 0.41
Mmp13P33435 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Mmp13P33435 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp13P33435 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Mmp13P33435 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.62■□□□□ 0.41
Mmp13P33435 Gm13158-201ENSMUST00000122007 736 ntBASIC17.62■□□□□ 0.41
Mmp13P33435 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.62■□□□□ 0.41
Mmp13P33435 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Mmp13P33435 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp13P33435 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mmp13P33435 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Mmp13P33435 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.61■□□□□ 0.41
Mmp13P33435 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Mmp13P33435 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.61■□□□□ 0.41
Mmp13P33435 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.61■□□□□ 0.41
Mmp13P33435 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.61■□□□□ 0.41
Mmp13P33435 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp13P33435 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Gm5643-201ENSMUST00000117081 966 ntBASIC17.6■□□□□ 0.41
Mmp13P33435 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.6■□□□□ 0.41
Mmp13P33435 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.6■□□□□ 0.41
Mmp13P33435 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Mmp13P33435 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp13P33435 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.59■□□□□ 0.41
Mmp13P33435 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.59■□□□□ 0.41
Mmp13P33435 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Mmp13P33435 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.59■□□□□ 0.41
Mmp13P33435 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Mmp13P33435 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.59■□□□□ 0.41
Mmp13P33435 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp13P33435 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp13P33435 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Mmp13P33435 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp13P33435 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp13P33435 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Gm10418-201ENSMUST00000100943 576 ntBASIC17.58■□□□□ 0.4
Mmp13P33435 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.58■□□□□ 0.4
Mmp13P33435 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.58■□□□□ 0.4
Mmp13P33435 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Mmp13P33435 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp13P33435 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Mmp13P33435 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp13P33435 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms