Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SNRPA1P09661 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.52■■□□□ 1.68
SNRPA1P09661 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SNRPA1P09661 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.51■■□□□ 1.67
SNRPA1P09661 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SNRPA1P09661 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC25.51■■□□□ 1.67
SNRPA1P09661 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.51■■□□□ 1.67
SNRPA1P09661 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNRPA1P09661 KRT16P6-202ENST00000425692 1426 ntBASIC25.51■■□□□ 1.67
SNRPA1P09661 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.51■■□□□ 1.67
SNRPA1P09661 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNRPA1P09661 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SNRPA1P09661 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNRPA1P09661 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNRPA1P09661 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.51■■□□□ 1.67
SNRPA1P09661 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNRPA1P09661 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.51■■□□□ 1.67
SNRPA1P09661 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNRPA1P09661 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SNRPA1P09661 NIFKP9-201ENST00000419265 221 ntBASIC25.5■■□□□ 1.67
SNRPA1P09661 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC25.5■■□□□ 1.67
SNRPA1P09661 KSR1P1-201ENST00000446298 240 ntBASIC25.5■■□□□ 1.67
SNRPA1P09661 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.5■■□□□ 1.67
SNRPA1P09661 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SNRPA1P09661 AP006587.1-201ENST00000534129 1502 ntBASIC25.5■■□□□ 1.67
SNRPA1P09661 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
SNRPA1P09661 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNRPA1P09661 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.5■■□□□ 1.67
SNRPA1P09661 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNRPA1P09661 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNRPA1P09661 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRPA1P09661 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.49■■□□□ 1.67
SNRPA1P09661 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRPA1P09661 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SNRPA1P09661 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SNRPA1P09661 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRPA1P09661 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRPA1P09661 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SNRPA1P09661 MMP23A-201ENST00000234610 1017 ntBASIC25.49■■□□□ 1.67
SNRPA1P09661 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SNRPA1P09661 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
SNRPA1P09661 REXO1L10P-201ENST00000615707 1290 ntBASIC25.49■■□□□ 1.67
SNRPA1P09661 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SNRPA1P09661 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRPA1P09661 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRPA1P09661 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRPA1P09661 TFP1-202ENST00000475455 1573 ntBASIC25.48■■□□□ 1.67
SNRPA1P09661 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SNRPA1P09661 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SNRPA1P09661 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNRPA1P09661 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.48■■□□□ 1.67
SNRPA1P09661 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.48■■□□□ 1.67
SNRPA1P09661 RBM17P1-201ENST00000453646 1190 ntBASIC25.48■■□□□ 1.67
SNRPA1P09661 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.48■■□□□ 1.67
SNRPA1P09661 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SNRPA1P09661 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.48■■□□□ 1.67
SNRPA1P09661 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.48■■□□□ 1.67
SNRPA1P09661 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
SNRPA1P09661 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNRPA1P09661 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC25.47■■□□□ 1.67
SNRPA1P09661 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.47■■□□□ 1.67
SNRPA1P09661 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.47■■□□□ 1.67
SNRPA1P09661 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNRPA1P09661 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
SNRPA1P09661 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNRPA1P09661 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC25.47■■□□□ 1.67
SNRPA1P09661 CR392000.1-201ENST00000624770 1228 ntBASIC25.47■■□□□ 1.67
SNRPA1P09661 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.47■■□□□ 1.67
SNRPA1P09661 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNRPA1P09661 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
SNRPA1P09661 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNRPA1P09661 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.47■■□□□ 1.67
SNRPA1P09661 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNRPA1P09661 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC25.46■■□□□ 1.67
SNRPA1P09661 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNRPA1P09661 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SNRPA1P09661 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNRPA1P09661 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.46■■□□□ 1.67
SNRPA1P09661 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.46■■□□□ 1.67
SNRPA1P09661 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.46■■□□□ 1.67
SNRPA1P09661 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.46■■□□□ 1.67
SNRPA1P09661 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNRPA1P09661 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC25.46■■□□□ 1.67
SNRPA1P09661 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNRPA1P09661 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC25.46■■□□□ 1.67
SNRPA1P09661 AC018553.1-201ENST00000616682 1458 ntBASIC25.46■■□□□ 1.67
SNRPA1P09661 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC25.46■■□□□ 1.67
SNRPA1P09661 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.46■■□□□ 1.67
SNRPA1P09661 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
SNRPA1P09661 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC25.45■■□□□ 1.67
SNRPA1P09661 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SNRPA1P09661 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SNRPA1P09661 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.45■■□□□ 1.66
SNRPA1P09661 AC116562.2-201ENST00000507042 360 ntBASIC25.45■■□□□ 1.66
SNRPA1P09661 KRT18P21-201ENST00000515767 1272 ntBASIC25.45■■□□□ 1.66
SNRPA1P09661 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.45■■□□□ 1.66
SNRPA1P09661 AC079598.2-202ENST00000546624 1451 ntBASIC25.45■■□□□ 1.66
SNRPA1P09661 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SNRPA1P09661 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SNRPA1P09661 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms