Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RHOP08100 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHOP08100 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RHOP08100 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RHOP08100 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RHOP08100 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.73■□□□□ 0.91
RHOP08100 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RHOP08100 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RHOP08100 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.73■□□□□ 0.91
RHOP08100 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.73■□□□□ 0.91
RHOP08100 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.73■□□□□ 0.91
RHOP08100 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.73■□□□□ 0.91
RHOP08100 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.73■□□□□ 0.91
RHOP08100 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RHOP08100 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RHOP08100 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.73■□□□□ 0.91
RHOP08100 AC005363.2-201ENST00000618631 242 ntBASIC20.73■□□□□ 0.91
RHOP08100 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.73■□□□□ 0.91
RHOP08100 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RHOP08100 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RHOP08100 AP006587.1-201ENST00000534129 1502 ntBASIC20.73■□□□□ 0.91
RHOP08100 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RHOP08100 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RHOP08100 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RHOP08100 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RHOP08100 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RHOP08100 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RHOP08100 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.72■□□□□ 0.91
RHOP08100 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.72■□□□□ 0.91
RHOP08100 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.72■□□□□ 0.91
RHOP08100 AL390955.1-201ENST00000428694 934 ntBASIC20.72■□□□□ 0.91
RHOP08100 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.72■□□□□ 0.91
RHOP08100 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.72■□□□□ 0.91
RHOP08100 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.72■□□□□ 0.91
RHOP08100 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.72■□□□□ 0.91
RHOP08100 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RHOP08100 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RHOP08100 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RHOP08100 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.72■□□□□ 0.91
RHOP08100 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RHOP08100 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.72■□□□□ 0.91
RHOP08100 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RHOP08100 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RHOP08100 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RHOP08100 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.71■□□□□ 0.91
RHOP08100 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHOP08100 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RHOP08100 AC006128.1-201ENST00000624704 1661 ntBASIC20.71■□□□□ 0.91
RHOP08100 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHOP08100 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.71■□□□□ 0.91
RHOP08100 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.71■□□□□ 0.91
RHOP08100 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
RHOP08100 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.71■□□□□ 0.91
RHOP08100 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.71■□□□□ 0.91
RHOP08100 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.71■□□□□ 0.91
RHOP08100 FITM1-202ENST00000559294 800 ntBASIC20.71■□□□□ 0.91
RHOP08100 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.71■□□□□ 0.91
RHOP08100 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.71■□□□□ 0.91
RHOP08100 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RHOP08100 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RHOP08100 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.71■□□□□ 0.91
RHOP08100 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHOP08100 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RHOP08100 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RHOP08100 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RHOP08100 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHOP08100 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RHOP08100 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHOP08100 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RHOP08100 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHOP08100 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RHOP08100 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHOP08100 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RHOP08100 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.7■□□□□ 0.9
RHOP08100 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.7■□□□□ 0.9
RHOP08100 C1QL1P1-201ENST00000568105 661 ntBASIC20.7■□□□□ 0.9
RHOP08100 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.7■□□□□ 0.9
RHOP08100 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RHOP08100 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.7■□□□□ 0.9
RHOP08100 AC092865.7-201ENST00000641832 219 ntBASIC20.7■□□□□ 0.9
RHOP08100 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
RHOP08100 LINC01568-207ENST00000641790 1380 ntBASIC20.7■□□□□ 0.9
RHOP08100 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RHOP08100 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RHOP08100 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHOP08100 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHOP08100 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHOP08100 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.69■□□□□ 0.9
RHOP08100 CYP2D8P-201ENST00000433633 1490 ntBASIC20.69■□□□□ 0.9
RHOP08100 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RHOP08100 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.69■□□□□ 0.9
RHOP08100 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RHOP08100 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RHOP08100 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.69■□□□□ 0.9
RHOP08100 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RHOP08100 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.69■□□□□ 0.9
RHOP08100 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms