Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Krt1P04104 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Krt1P04104 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Krt1P04104 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Krt1P04104 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Krt1P04104 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Krt1P04104 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Krt1P04104 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Krt1P04104 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Krt1P04104 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Krt1P04104 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Krt1P04104 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Krt1P04104 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Krt1P04104 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Krt1P04104 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Krt1P04104 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Krt1P04104 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Krt1P04104 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.21
Krt1P04104 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Krt1P04104 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Krt1P04104 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt1P04104 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt1P04104 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Krt1P04104 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Krt1P04104 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.33■□□□□ 0.2
Krt1P04104 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.33■□□□□ 0.2
Krt1P04104 Gm45102-201ENSMUST00000207427 857 ntBASIC16.33■□□□□ 0.2
Krt1P04104 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt1P04104 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt1P04104 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt1P04104 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt1P04104 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Krt1P04104 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt1P04104 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt1P04104 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt1P04104 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Krt1P04104 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.33■□□□□ 0.2
Krt1P04104 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt1P04104 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Krt1P04104 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt1P04104 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt1P04104 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt1P04104 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt1P04104 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt1P04104 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.32■□□□□ 0.2
Krt1P04104 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.32■□□□□ 0.2
Krt1P04104 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt1P04104 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt1P04104 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt1P04104 Gm9847-201ENSMUST00000052528 599 ntBASIC16.32■□□□□ 0.2
Krt1P04104 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt1P04104 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Krt1P04104 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt1P04104 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.32■□□□□ 0.2
Krt1P04104 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt1P04104 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt1P04104 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Krt1P04104 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Krt1P04104 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Krt1P04104 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Krt1P04104 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Krt1P04104 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.31■□□□□ 0.2
Krt1P04104 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.31■□□□□ 0.2
Krt1P04104 Mir8112-201ENSMUST00000184382 131 ntBASIC16.31■□□□□ 0.2
Krt1P04104 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.31■□□□□ 0.2
Krt1P04104 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Krt1P04104 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Krt1P04104 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.31■□□□□ 0.2
Krt1P04104 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt1P04104 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Krt1P04104 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Krt1P04104 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt1P04104 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt1P04104 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.3■□□□□ 0.2
Krt1P04104 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.3■□□□□ 0.2
Krt1P04104 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Krt1P04104 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Krt1P04104 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt1P04104 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Krt1P04104 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt1P04104 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt1P04104 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Krt1P04104 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt1P04104 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms