Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.76■□□□□ 0.27
ClppO88696 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.76■□□□□ 0.27
ClppO88696 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ClppO88696 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
ClppO88696 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
ClppO88696 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.75■□□□□ 0.27
ClppO88696 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.75■□□□□ 0.27
ClppO88696 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ClppO88696 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.75■□□□□ 0.27
ClppO88696 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.75■□□□□ 0.27
ClppO88696 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ClppO88696 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ClppO88696 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.74■□□□□ 0.27
ClppO88696 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.74■□□□□ 0.27
ClppO88696 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.74■□□□□ 0.27
ClppO88696 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ClppO88696 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClppO88696 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
ClppO88696 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ClppO88696 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClppO88696 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClppO88696 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClppO88696 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ClppO88696 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.73■□□□□ 0.27
ClppO88696 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
ClppO88696 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.73■□□□□ 0.27
ClppO88696 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ClppO88696 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ClppO88696 Gm10517-202ENSMUST00000192970 758 ntBASIC16.73■□□□□ 0.27
ClppO88696 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.73■□□□□ 0.27
ClppO88696 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ClppO88696 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ClppO88696 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ClppO88696 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ClppO88696 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.72■□□□□ 0.27
ClppO88696 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ClppO88696 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClppO88696 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ClppO88696 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClppO88696 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ClppO88696 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms