Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tspan6O70401 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tspan6O70401 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.79■□□□□ 0.28
Tspan6O70401 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.79■□□□□ 0.28
Tspan6O70401 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tspan6O70401 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.79■□□□□ 0.28
Tspan6O70401 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tspan6O70401 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tspan6O70401 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tspan6O70401 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tspan6O70401 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tspan6O70401 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tspan6O70401 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tspan6O70401 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tspan6O70401 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tspan6O70401 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tspan6O70401 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.79■□□□□ 0.28
Tspan6O70401 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tspan6O70401 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tspan6O70401 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tspan6O70401 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tspan6O70401 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.78■□□□□ 0.28
Tspan6O70401 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.78■□□□□ 0.28
Tspan6O70401 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Tspan6O70401 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tspan6O70401 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tspan6O70401 Gm10566-201ENSMUST00000086739 996 ntBASIC16.78■□□□□ 0.28
Tspan6O70401 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tspan6O70401 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.78■□□□□ 0.28
Tspan6O70401 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tspan6O70401 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tspan6O70401 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Tspan6O70401 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tspan6O70401 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Tspan6O70401 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.77■□□□□ 0.28
Tspan6O70401 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.77■□□□□ 0.28
Tspan6O70401 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tspan6O70401 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.77■□□□□ 0.28
Tspan6O70401 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tspan6O70401 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tspan6O70401 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tspan6O70401 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.77■□□□□ 0.27
Tspan6O70401 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tspan6O70401 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tspan6O70401 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tspan6O70401 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tspan6O70401 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Tspan6O70401 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.76■□□□□ 0.27
Tspan6O70401 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Tspan6O70401 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.76■□□□□ 0.27
Tspan6O70401 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Tspan6O70401 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tspan6O70401 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tspan6O70401 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tspan6O70401 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Tspan6O70401 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Tspan6O70401 Gm11950-201ENSMUST00000121615 838 ntBASIC16.75■□□□□ 0.27
Tspan6O70401 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.75■□□□□ 0.27
Tspan6O70401 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.75■□□□□ 0.27
Tspan6O70401 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tspan6O70401 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tspan6O70401 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tspan6O70401 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tspan6O70401 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tspan6O70401 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tspan6O70401 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tspan6O70401 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tspan6O70401 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tspan6O70401 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tspan6O70401 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.74■□□□□ 0.27
Tspan6O70401 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tspan6O70401 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tspan6O70401 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tspan6O70401 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms