Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDH7O60245 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDH7O60245 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH7O60245 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH7O60245 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH7O60245 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH7O60245 LSM12P1-201ENST00000411836 588 ntBASIC19.04■□□□□ 0.64
PCDH7O60245 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH7O60245 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH7O60245 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH7O60245 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH7O60245 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.04■□□□□ 0.64
PCDH7O60245 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH7O60245 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.04■□□□□ 0.64
PCDH7O60245 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDH7O60245 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH7O60245 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH7O60245 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH7O60245 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH7O60245 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH7O60245 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH7O60245 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH7O60245 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH7O60245 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH7O60245 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH7O60245 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH7O60245 KRT16P6-202ENST00000425692 1426 ntBASIC19.03■□□□□ 0.64
PCDH7O60245 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH7O60245 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH7O60245 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH7O60245 AC105036.2-201ENST00000569468 176 ntBASIC19.03■□□□□ 0.64
PCDH7O60245 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDH7O60245 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDH7O60245 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDH7O60245 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH7O60245 MKRN4P-201ENST00000444706 1521 ntBASIC19.03■□□□□ 0.64
PCDH7O60245 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH7O60245 AC125437.2-201ENST00000625180 2167 ntBASIC19.03■□□□□ 0.64
PCDH7O60245 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH7O60245 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH7O60245 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH7O60245 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH7O60245 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDH7O60245 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH7O60245 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH7O60245 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDH7O60245 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH7O60245 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH7O60245 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH7O60245 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH7O60245 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH7O60245 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCDH7O60245 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH7O60245 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDH7O60245 HLA-G-202ENST00000376815 851 ntBASIC19.02■□□□□ 0.64
PCDH7O60245 HLA-G-203ENST00000376818 1127 ntBASIC19.02■□□□□ 0.64
PCDH7O60245 AF201337.1-201ENST00000520239 748 ntBASIC19.02■□□□□ 0.64
PCDH7O60245 RAP2CP1-201ENST00000605103 478 ntBASIC19.02■□□□□ 0.64
PCDH7O60245 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.02■□□□□ 0.64
PCDH7O60245 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH7O60245 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDH7O60245 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
PCDH7O60245 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
PCDH7O60245 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDH7O60245 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.02■□□□□ 0.63
PCDH7O60245 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
PCDH7O60245 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH7O60245 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH7O60245 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDH7O60245 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH7O60245 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH7O60245 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PCDH7O60245 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH7O60245 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH7O60245 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH7O60245 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH7O60245 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDH7O60245 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDH7O60245 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDH7O60245 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH7O60245 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH7O60245 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH7O60245 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH7O60245 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH7O60245 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19■□□□□ 0.63
PCDH7O60245 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH7O60245 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms